Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl12g00268 ATGAGAGCTATTAATCATCGCTTCCTATTCAATCTCTCCCCAATCAAAACCAACATCATCATCCCCTCTTTCGTCAAGAACATGTCTGGAGGTGGAGATCAAAACTCTGGTTTTAGCAGACCCAGATTGGTGGTGAAGAGAGTATTGGCCAAGCCTCAACATGAGGGAGATGGAGCTGTTGTTAGAAGAAGCGTTGGGAGGATGGAGTTGAAGTATTTGGATCCTTTTCTCATGTTGGATGAATTCTCAGTTTCGGCTCCTGCTGGATTTCCTGACCATCCACATAGAGGTTTGTTTGAGGGGTCTTATCAATCCGGAGCTTTCACTCATCAAGATTTTGCAGGTCACAAGGGAACAATTAGAACTGGTGATGTGCAGTGGATGACTGCAGGTAGAGGGATAATTCACTCAGAAATGCCAGCAAGAGAAGGAACCCAGAAGGGTTTGCAGCTCTGGATCAATCTATCATCCAAAGACAAAATGGTTGAGCCAAGGTACCAAGAGTTGTTAAGTGAAGACATCAAGAGGGCAGAGAAAGATGGGGTTGAGGTCCGGATTATAGCAGGAGAAGCAATGGGGGTCCAATCGCCAGTGTATACCCGAACACCTACAATGTACCTTGATTTCACTCTAAAACCTGGAGCACAACTGCACCAGAGTATCCCAGAGTTGTGGAATTCCTTTGTATATGTCATTGAAGGTGAGGGAACCTTCGGTTCCATGAATTTGTCCCCACAAACAGCTCACCATGTCCTGGTCTTGGGTCCTGGAGATGGGTTCAGTGTCTGGAACAAGTCTGCCAAGCTGCTTAGATTCGTCCTAATCGGAGGACAGCCTCTTAACGAACCCGTTGTTCAGTATGGTCCATTCGTGATGAACACACAAGCCGAGATCGATCAGACCATAGAAGACTATCAGTTTGGCCGGAACGGATTTGAAAAGGCCAAGTACTGGAAATCTCAACCACTGGGTTAA 975 0.4626 MRAINHRFLFNLSPIKTNIIIPSFVKNMSGGGDQNSGFSRPRLVVKRVLAKPQHEGDGAVVRRSVGRMELKYLDPFLMLDEFSVSAPAGFPDHPHRGLFEGSYQSGAFTHQDFAGHKGTIRTGDVQWMTAGRGIIHSEMPAREGTQKGLQLWINLSSKDKMVEPRYQELLSEDIKRAEKDGVEVRIIAGEAMGVQSPVYTRTPTMYLDFTLKPGAQLHQSIPELWNSFVYVIEGEGTFGSMNLSPQTAHHVLVLGPGDGFSVWNKSAKLLRFVLIGGQPLNEPVVQYGPFVMNTQAEIDQTIEDYQFGRNGFEKAKYWKSQPLG* 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl12g00268 324 Gene3D Jelly Rolls 55 306 IPR014710 -
Eupl12g00268 324 PANTHER PIRIN-RELATED 36 321 IPR012093 -
Eupl12g00268 324 SUPERFAMILY RmlC-like cupins 42 321 IPR011051 -
Eupl12g00268 324 CDD cupin_pirin_N 59 155 - -
Eupl12g00268 324 Pfam Pirin 61 153 IPR003829 -
Eupl12g00268 324 CDD cupin_pirin_C 203 279 - -
Eupl12g00268 324 Gene3D Jelly Rolls 175 280 IPR014710 -
Eupl12g00268 324 PIRSF Pirin 40 319 IPR012093 -
Eupl12g00268 324 Pfam Pirin C-terminal cupin domain 206 311 IPR008778 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl12g00268 Eupl-Chr12 11132239 11134008 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl12g00268 39 316 Calmodulin-binding Proteins AT3G59220 63.345 7.66e-130 370
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl12g00268 K06911 - vvi:100254895 508.834