Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl12g00262 ATGGGCATCCATGAGAAGGTTGAAGCACAAGACATCCAAGCACAGGCTCATCTATGGAGAATCATCTATGGCTTCGCTGATACCCTGGTCCTCCGATGCGCAGTCGAGCTCGGCATCGTAGACATCATCAAGAACAACATCGAGCCAATCACACTATCCAAACTCGCGTTGAAGCTTCCCATCTCCTGCGTCAATTCCGATCATCTGTACCGGATGCTACGATACTTGGTGCACATGCATATCTTAAGAGAAGAGAACACTGACGGCGCGAAGTGTTACATGCTCGAACCCGTCGCTACGTTGCTCTTAAAGGATGCAAAGACAAGTATGGTCCCAATCATACTGGGGATGACCCAGAAAGATTTCATGGTGCCATGGCATTACATGAAAGATGGTTTAAGCGACGAAGGTACTGCTTTCGAGAAGGCGATGGGGATGACGATATGGGAGTACCTTGAGGGACACCAAGACCAGAGCCAACTCTTCAATGAGAGCATGGCTGGTGAAACAAGGCTCCTTACATCTTCGCTTATCGATGGTTCTCGAGACTTGTTTGAAGGCATAACGTCTCTTGTAGATGTCGGCGGAGGAAATGGTACCACTCTTAATGCCATATCGGAGGCCTTTCCCCATATAAGGTGCACCCTCTTCGACCTCCCTCATGTCATCGCCAACTCCTGCGACTACCCGAAACTTGAACGCATCCCTGGCGACATGTTTAAATCCATACCTAGAGCCCAAGCCATCTTACTCAAGCTAATTTTGCATGATTGGAGTGACGATGACTGTGTCAAGATCCTAAAACAGTGCAAGGAAGCGGTGCCGAGTGAGGTGGGGAAGGTAATTATAGTGGACGTGGCACTAGATGAGGAGTCTGAACATGAGCTTAGCAGCACAAGAATGATTCTCGATATCGATATGTTGGTGAACACTGGTGGTAAAGAAAGGACTGAAGAGGATTGGGAGAAGTTGATTAAACGTGCAGGTTATCGAGGTTTCAAGGTCAGGCAAATTGCGGCCATACAGTCGGCCCTTATTTATCGATTGCTAGAGAAGAACAAAGTTCATGTTAGTGAGGAGATCATTTCCCTTCTTCTTCTTGTTATCGTCGTCGTTACTTATTTGTCGAGCTTCTTCTTCAATTCGGAGTCTAACGATCAAACTCTCCATCGTGAACTCCTTCGATTTGTGTCAAAGAGTGTTCCTGAAATCCTTCCAAGAGGGATGCAATTTGTCAATTAA 1242 0.4678 MGIHEKVEAQDIQAQAHLWRIIYGFADTLVLRCAVELGIVDIIKNNIEPITLSKLALKLPISCVNSDHLYRMLRYLVHMHILREENTDGAKCYMLEPVATLLLKDAKTSMVPIILGMTQKDFMVPWHYMKDGLSDEGTAFEKAMGMTIWEYLEGHQDQSQLFNESMAGETRLLTSSLIDGSRDLFEGITSLVDVGGGNGTTLNAISEAFPHIRCTLFDLPHVIANSCDYPKLERIPGDMFKSIPRAQAILLKLILHDWSDDDCVKILKQCKEAVPSEVGKVIIVDVALDEESEHELSSTRMILDIDMLVNTGGKERTEEDWEKLIKRAGYRGFKVRQIAAIQSALIYRLLEKNKVHVSEEIISLLLLVIVVVTYLSSFFFNSESNDQTLHRELLRFVSKSVPEILPRGMQFVN* 414
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl12g00262 413 PIRSF O-mtase 1 348 IPR016461 GO:0008168
Eupl12g00262 413 PANTHER O-METHYLTRANSFERASE 12 330 IPR016461 GO:0008168
Eupl12g00262 413 Pfam Dimerisation domain 30 77 IPR012967 GO:0046983
Eupl12g00262 413 Gene3D Vaccinia Virus protein VP39 104 347 IPR029063 -
Eupl12g00262 413 SUPERFAMILY "Winged helix" DNA-binding domain 8 105 IPR036390 -
Eupl12g00262 413 Gene3D - 4 102 IPR036388 -
Eupl12g00262 413 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 19 350 IPR016461 GO:0008168
Eupl12g00262 413 Pfam O-methyltransferase domain 126 331 IPR001077 GO:0008171
Eupl12g00262 413 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 108 342 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl12g00262 Eupl-Chr12 10954235 10962882 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl12g00262 7 335 Monolignol Biosynthesis Gene Families AT5G54160 36.686 6.53e-65 210
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl12g00262 - K22588 ag:BAB08005 533.102