Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl12g00256 ATGAGAATAACTACTGGCAGAAATAACAAGTTCGTTCTTGTTTTAGGAGTGACCTCTAGCTTCATGGCCGAATGCCGGGCTGTTGTCAAAGGCTTGGAATGCGCGGCTAGAAAAGGATGGAAGAACATATGGATAGAATCCGACTCGTCTGCAGTTCTCCAAGCGTTTGGATTGAAAAAGATTCCTTGGAAAGTTAGACCTCGTTGGGAGGCAGTGCTTATCAAGACTAACCATTGCTTTATCACCTCTACTTGGAGGGAGGTAAACTTCTCAGCCGATAAGTTAGCGAACCTGGGGTCTTCTTTAGCTGAGGATGAGGTTGAGATTTTTGTAGAGCGACCTCCTTTTTTGAAAATGGAGCTCCTACCACTGAGAATTGTCTCTATTTTCCGTTACGAAGCAAAGATGGCCGATCAACTTCTTGTTACCATTGCAGGGGAAATCTTGAAGAAGTTGCTCTCCACTGCCTTCGATGAGATTAGTGGAGTTTTGGGTGTTGAGAAAGATCTGAAATTACTCCAATTCAACTTAACAAAGATCCAAGCCATACTACATGACGCGGACAAGAAGCAAGTAGAGGACGAGACAGTGAAACTTTGGTTGAAAATTCTTAAGGATTTAGCTTATGATGCAGAAGACATGTTGGATGAGGCTGCTTCTGATGCTCTTCGACACAAAATAAAGAAGGTACACAACTCTTCTTCACCCTCGATTCCACTTGCATTTCGTCTTAAGATGGCTCGTAAGATTATATGTATCAATCAGAACATGTTAAAAGAAATTGAAAAAGAAAAAGATATGTTCCAACATATACATACACAAACCAGAGAGAACCGAGAAACCCACTCTGTCCTGGATGATTCAAAGGTTGTTGGAAGGGAAAATGATAAGTCAACGGTAGTAAATTTCTTAATGTCCTCAACCCATGAAGATATTGTCTCAGTCGTTTCCATAGTGGGTATGGGGGGGTTAGGGAAGACCACACTTGCTCAATTAGCCTATAATGACGAGGATGTAAAGACGCATTTTTGTCTAAGAATGTGGATTTGTGTGTCTTATGATTGTGATTTCAAAACGCTTTTAAGAAAAATTTTAGAATCTATTCCAGAAAATAAATGTGGTGTATCTAGCACAGCAAACATGATGGCGTGTGACCTTCTAGAAAAGTTGCGCGGGAAGAAGTTTTTACTTGTATTAGATGATGTATGGAATGTGGATGAGGAGACGTGGGGTAAATTGGAAAGTCTGCTAAAAGGTGGTGCTAGAGGAAGTAAAATCATTGTAACGACACGAAGTAATGAAATTACATCAATCATGGGGGCATGTCTTACACTCCATTTGCAAAAATTATCAGAAGCTGAATGTTGGGATCTTTTCAAGGTACAAGCATTTAACACCAGAGGACCAGAAGAAACTTCGAACTTGGTGGTAATTGGGAAGGAAATTGTGAAAAAGAGTGGAGGTGTGCCGCTGGCAGTAAAGACTCTTGGGGTGTTGATGCACTCTAAAACAGAGGAACACGAGTGGTTGTCTGTCAAAAATTGTGAAATTCGTGATCTAACTCGATATGAAACTGGAATCTTACCTACGTTGAAGTTGAGTTATGATCCTTTGCCACCATTTTTAAAACAATGTTTCTCGTATTGTTCAATGTTTCCCAAGAATTATAATATTAACAAAAAGATGTTAATCCAACTATGGATGGCAGAGGGATTCCTCCAACCATCGGAAGGAAGTAGACCGATGGAGGATATTGGTGACGAGTATATCAAAATATTGTCCCGTAGTTCATTATTCGAAGATGTACAGAAAAATGAATATGAAGTCATACATGCGTACAAGATGCATGATCTTGTACATGATCTTGCACGATCAGTTGTGGGATTTGAATGCTCGATTGTGGAGGCAAGAAGGTTAGAAGAAGATATTTCTGCAATTCGTCGTTTGTCATTGGTTTATAATGAAGAAATATCATCGATTCCAAGACCTTCGCATAGGCAGCCTAATAAATTGCGCACGTTTATTTCACCATCTTTGAAATCTAGATATTCCATCAAGGGATTCGAAGTTGTGTTCTTGAACTTTAAGTGTTTACGGGTCCTCGATTTACATGGCACTGGGATTAAAAAGTTGCCATCTTCAATCGGCAAGTTGAAACTTCTTCGGTATCTTGACCTTTCATTGACTTATCTTGAAGCATTACCTGAGTCTATCACTAGGCTCTGCAATTTGCAGACGCTGAATCTGAAACACTGCCGTAATCTTAAAGAGTTTCCTAGGAACATGAAAAAATTGATTAACTTGAGACATCTTGAAATCGACAATCTTGGACGATGGACTCAAATGCCAACAGAGATAGGAAAACTAAGTTCCCTTCAAACATTACCAGTATTTAAGGTGGGAAAGGATAAGGGGCATGATATTATAGAGTTGCAATGCCTAAACCTCCTTGCAGGTGAGTTAAGGATTGAGAACCTCCAAAATGTGAGAGATGGAATATGTAGCATGGGAGCAAATTTAAAGGGGAAGCAAAACATTCACACATTGCAATTGCATTGGGAAGGTTGTACTTCGGATGACAACTTGAGAAGTAACATTGATCATGTGCTGGAAGGCCTTCGACCTCACAAAAATTTGAAAAGGTTGGAAATTAGTTACTTTATGGGTATGAAATTAGCATCCTGGATGAGTAGTTCATCTCTCCCCAATTTGGTTGAGATCACACTAAAAGACTGCAACAGATGTGCAGATCTCCCAGCACTTGGGCAGCTATCCTCTCTTAAGGTTCTCAAGATAGCTGGAATGAACGTCGTGAAGTGTCTTGGTAAAGACTTCTATGGTAATGGAGCAAGAGCATTCTCATCGTTGAAAACTCTCGAACTAAGTTGGATGCTTTGTTTAAAAGAATGGTTGGAATTCCCTTCTTCTTTCCCTTGCCTTGAGGTGTTGAGCATCTACAAATGCCCCATGTTGACAATCACACCAAGTACTTTTCCTTCTCTTAAGGAACTGAGGATTGAGATGAGCAATAGCAAGGTAGTGAGCTTATTAGCAACAACCAAGCTAACCTGTCTCACCTCCCTTTGGATTGATGGATCTCCAGAGCTTACCTTCCTGCGAAACAATCACAAACTCCAGATACTATTAATTCGGCAATGCCCCAAGTTTCAAGAGTTCCGTCCCAACAAAGAGGGACAGTTCCTCAGCAGCTCTCTCCAGTCATTAGAGATACGGGATTGTCCTATGCTAACATCTGTGCCAGATGTATCAGGCTTGACTTCTCTTCGAGGATTACTTATTTCAGATTGTAAAAAATTGAAGATTTTGCCAAAGGGGGTGCAATGCCTCACTGCTCTTGAGAGCTTGATAATTGGTGGGTTTTGGAAGGAGATGGATTCTTTTCCTTTTTTGACTGGAGTAAAGGGTACCAAGATCCAACCCCTCGTCTCTCTTCGGAGGTTAGAGATTTCTGGATGGTCTAAGCTCCACTCTTTGCCAGACAAACTTCAGCTCCTTACCACACTACAAGAACTGACAGTACGTGACTTTCCTAATCTGATGGCTTTGCCTGAGTGGTTGAAAAACCTTTGTTCGCTTCAACGCTTGGAGATTTGCGGCTGCGAGAATCTGAAGCATATACCTTCTAAGCGTGGAATGCGATGCCTCAGTGCACTAAAAAAGCTCGAGATTTCAAAATGTCCCCTTTTGAAAATACAATGCGCCATGGAGACAGGCGAGGAGTGGCACAAGATAGCCCACATTCCACAAATCAGGATGGACTATAATCTGGTTCAAAGTCTTGCTAAAGATTAG 3813 0.4094 MRITTGRNNKFVLVLGVTSSFMAECRAVVKGLECAARKGWKNIWIESDSSAVLQAFGLKKIPWKVRPRWEAVLIKTNHCFITSTWREVNFSADKLANLGSSLAEDEVEIFVERPPFLKMELLPLRIVSIFRYEAKMADQLLVTIAGEILKKLLSTAFDEISGVLGVEKDLKLLQFNLTKIQAILHDADKKQVEDETVKLWLKILKDLAYDAEDMLDEAASDALRHKIKKVHNSSSPSIPLAFRLKMARKIICINQNMLKEIEKEKDMFQHIHTQTRENRETHSVLDDSKVVGRENDKSTVVNFLMSSTHEDIVSVVSIVGMGGLGKTTLAQLAYNDEDVKTHFCLRMWICVSYDCDFKTLLRKILESIPENKCGVSSTANMMACDLLEKLRGKKFLLVLDDVWNVDEETWGKLESLLKGGARGSKIIVTTRSNEITSIMGACLTLHLQKLSEAECWDLFKVQAFNTRGPEETSNLVVIGKEIVKKSGGVPLAVKTLGVLMHSKTEEHEWLSVKNCEIRDLTRYETGILPTLKLSYDPLPPFLKQCFSYCSMFPKNYNINKKMLIQLWMAEGFLQPSEGSRPMEDIGDEYIKILSRSSLFEDVQKNEYEVIHAYKMHDLVHDLARSVVGFECSIVEARRLEEDISAIRRLSLVYNEEISSIPRPSHRQPNKLRTFISPSLKSRYSIKGFEVVFLNFKCLRVLDLHGTGIKKLPSSIGKLKLLRYLDLSLTYLEALPESITRLCNLQTLNLKHCRNLKEFPRNMKKLINLRHLEIDNLGRWTQMPTEIGKLSSLQTLPVFKVGKDKGHDIIELQCLNLLAGELRIENLQNVRDGICSMGANLKGKQNIHTLQLHWEGCTSDDNLRSNIDHVLEGLRPHKNLKRLEISYFMGMKLASWMSSSSLPNLVEITLKDCNRCADLPALGQLSSLKVLKIAGMNVVKCLGKDFYGNGARAFSSLKTLELSWMLCLKEWLEFPSSFPCLEVLSIYKCPMLTITPSTFPSLKELRIEMSNSKVVSLLATTKLTCLTSLWIDGSPELTFLRNNHKLQILLIRQCPKFQEFRPNKEGQFLSSSLQSLEIRDCPMLTSVPDVSGLTSLRGLLISDCKKLKILPKGVQCLTALESLIIGGFWKEMDSFPFLTGVKGTKIQPLVSLRRLEISGWSKLHSLPDKLQLLTTLQELTVRDFPNLMALPEWLKNLCSLQRLEICGCENLKHIPSKRGMRCLSALKKLEISKCPLLKIQCAMETGEEWHKIAHIPQIRMDYNLVQSLAKD* 1271
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl12g00256 1270 Gene3D Ribonuclease Inhibitor 1012 1137 IPR032675 -
Eupl12g00256 1270 Gene3D Ribonuclease Inhibitor 808 1011 IPR032675 -
Eupl12g00256 1270 Gene3D Ribonuclease Inhibitor 1138 1247 IPR032675 -
Eupl12g00256 1270 Gene3D Ribonuclease Inhibitor 634 804 IPR032675 -
Eupl12g00256 1270 Gene3D - 269 443 IPR027417 -
Eupl12g00256 1270 Gene3D - 535 626 IPR036388 -
Eupl12g00256 1270 SUPERFAMILY L domain-like 614 1034 - -
Eupl12g00256 1270 FunFam Probable disease resistance protein At1g61300 272 442 - -
Eupl12g00256 1270 Gene3D - 3 100 IPR036397 GO:0003676
Eupl12g00256 1270 Pfam Reverse transcriptase-like 16 97 IPR002156 GO:0003676|GO:0004523
Eupl12g00256 1270 SUPERFAMILY RNI-like 953 1242 - -
Eupl12g00256 1270 Pfam NB-ARC domain 294 514 IPR002182 GO:0043531
Eupl12g00256 1270 PRINTS Disease resistance protein signature 315 330 - -
Eupl12g00256 1270 PRINTS Disease resistance protein signature 389 403 - -
Eupl12g00256 1270 PRINTS Disease resistance protein signature 486 500 - -
Eupl12g00256 1270 PRINTS Disease resistance protein signature 739 755 - -
Eupl12g00256 1270 CDD RNase_H_like 11 97 IPR044730 -
Eupl12g00256 1270 FunFam Probable disease resistance protein At1g63360 535 625 - -
Eupl12g00256 1270 PANTHER DISEASE RESISTANCE PROTEIN RP 192 985 IPR044974 GO:0006952
Eupl12g00256 1270 Gene3D - 146 253 - -
Eupl12g00256 1270 CDD RX-CC_like 149 217 IPR038005 -
Eupl12g00256 1270 Gene3D - 449 534 IPR042197 -
Eupl12g00256 1270 Pfam Rx N-terminal domain 147 229 IPR041118 -
Eupl12g00256 1270 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 274 549 IPR027417 -
Eupl12g00256 1270 SUPERFAMILY Ribonuclease H-like 9 101 IPR012337 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl12g00256 Eupl-Chr12 10778773 10783505 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl12g00256 313 934 WRKY Transcription Factor Family AT5G45050 22.609 1.89e-10 63.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl12g00256 - - psom:113318069 874.774