Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl12g00214 ATGACGGATCGCTCTTTTGGAAATAGGGGCTGTAACTGTCTGGCTGGTCTGGAGTGCTTACTGAACATCATCAGGGCCCTCAGGATGGGGTCCTGCTTATCAGCAGATGGGAGGAGCTCTCTCCCCTATTCTCCAACATCTGCCTCAGGGCCCAGGAAGCAGAGGAGGAACTCAAAGAAGAAGCTGGGAATGTGGAACTCTTCGTTCAATTCCAATAGGGAAGAACAACTACAAAGAGTTCCCGGGAGGATGTTTTTGAATGGGGGCAGCGATGTTGCTTCAGTGTTTACCCAGCAAGGCAAGAAAGGGACCAACCAGGATGCTATGATTGTTTGGGAGAATTTCGGTTCAAGAACGGACACAGTCTTCTGTGGGGTTTTCGATGGCCATGGTCCCTACGGCCATATGGTGGCAAGAAGAGTGAGGGATTCTCTTCCTCTGAAGCTCAGTGCCCACTGGGAAGTAAACATAGGCAGCGAAGATGGGTTCAGAGAGAACAGCAGCACTGCTGTAGTAAGTCTGACCTCTGAAGAAACTGCCTCTTTATGTGCCGATGAGGAAGCCAGAGCCTCCATGGATCTTGAAGATAAGGAGAATCACCCAGAGATCTTTCTGACCCTGAAAGAGTCATTTCTGAAGGCTTTTAATGTTATGGATAAGGAACTGAGACTGCACCCGAAAATTGATTCCTTCTGCAGTGGGACAACTGCAGTAACACTCGTCAAACAGGGTCAGGATCTTGTTATTGGAAATGTAGGGGATTCAAGAGCCATACTGGGGACAAGAGATCATGATGGCTCTCTTATTGCTGTTCAGCTGACTGTGGATCTCAAACCAAATCTCCCAAGGGAAGCAGAGAGGATCAGGCAATGCAAAGGACGGGTTTTTGCCCTTCAGGATGAACCAGATGTGGCTCGAGTTTGGCTGCCAAACAACAACGCCCCTGGCTTGGCGATGGCCCGGGCTTTCGGGGATTTCTGCCTCAAGGATTTTGGTTTGATCTCCGTGCCAGAGATTACATATCGACACCTCACTGAAAAGGATGAATTTATAGTGTTGGCTACTGATGGGGTCTGGGATGTGCTTTCAAACAAGGAAGTGGTAGACATAGTGGCCTCAGCCCCGGCACGGACCTCTGCAGCTCAGGTCCTGGTTGAGTCAGCGGTGCGAGCCTGGAGGTTCAAGTATCCGACCTCCAAGGTTGACGACTGCGCTGTAGTCTGCCTATTCTTTGATTCCAATCCAAACAATTCCACCATCATCTCCGATTCCAAATCCAAAGAACAGCTGACATCATCAGACCAACTCGACATTGGCAATGAGAAACAAGAGGACCCCTTGGGTCCAGTTGGGTTGGACCGATCGGGAACAGTACGGACGTGTCCTGAAATTCTTCCAGAGGGAAAGGAAGAAGCGTGGAAGCAGGCGGTAAGGCCTATGGTGTTGGGAGACGAGTGGTCTGCCCTCGAAGGTGTCTCACGTGTGAACACAATGTTGACTCTACCGAGGTTTGATGCCGGAAAGGAGAAGCGTCCCACTGGAGAGACAAAGGCTCAAAAGTGA 1563 0.5022 MTDRSFGNRGCNCLAGLECLLNIIRALRMGSCLSADGRSSLPYSPTSASGPRKQRRNSKKKLGMWNSSFNSNREEQLQRVPGRMFLNGGSDVASVFTQQGKKGTNQDAMIVWENFGSRTDTVFCGVFDGHGPYGHMVARRVRDSLPLKLSAHWEVNIGSEDGFRENSSTAVVSLTSEETASLCADEEARASMDLEDKENHPEIFLTLKESFLKAFNVMDKELRLHPKIDSFCSGTTAVTLVKQGQDLVIGNVGDSRAILGTRDHDGSLIAVQLTVDLKPNLPREAERIRQCKGRVFALQDEPDVARVWLPNNNAPGLAMARAFGDFCLKDFGLISVPEITYRHLTEKDEFIVLATDGVWDVLSNKEVVDIVASAPARTSAAQVLVESAVRAWRFKYPTSKVDDCAVVCLFFDSNPNNSTIISDSKSKEQLTSSDQLDIGNEKQEDPLGPVGLDRSGTVRTCPEILPEGKEEAWKQAVRPMVLGDEWSALEGVSRVNTMLTLPRFDAGKEKRPTGETKAQK* 521
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl12g00214 520 FunFam probable protein phosphatase 2C 33 87 414 - -
Eupl12g00214 520 Gene3D - 90 413 IPR036457 -
Eupl12g00214 520 MobiDBLite consensus disorder prediction 38 67 - -
Eupl12g00214 520 MobiDBLite consensus disorder prediction 421 437 - -
Eupl12g00214 520 MobiDBLite consensus disorder prediction 421 458 - -
Eupl12g00214 520 PANTHER PROTEIN PHOSPHATASE 68 409 IPR015655 GO:0004722|GO:0006470
Eupl12g00214 520 Pfam Protein phosphatase 2C 206 389 IPR001932 -
Eupl12g00214 520 CDD PP2Cc 92 411 IPR001932 -
Eupl12g00214 520 SUPERFAMILY PP2C-like 92 413 IPR036457 -
Eupl12g00214 520 ProSiteProfiles PPM-type phosphatase domain profile. 92 411 IPR001932 -
Eupl12g00214 520 SMART PP2C_4 81 409 IPR001932 -
Eupl12g00214 520 MobiDBLite consensus disorder prediction 38 52 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl12g00214 Eupl-Chr12 7261327 7274906 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl12g00214 29 508 PP2C-type Phosphatase Gene Family AT3G02750 58.333 0.0 571
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl12g00214 - - msin:131239753 726.087