Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl12g00206 ATGTCGAGAAACGTTGTTTCTTCGGCGAATTCGATGTTTCCCCCTTTCACTGGTTACTGTGGCTCCTCTCGCTCTGCTAGATTTTTCATTCCAAGCAGAAAGAGATTGAGTTCATGCTTTGGGGAGAGAAAGATCGTCTGCGCTTGTTCGGCGCCTCCGAGGAACTGGAGCGATGGCCTTTCGGCAGTCAAGATTAACGAGGATTCATCTATCCTGGAGAATTTGAGCGCGGGTAGATATGTTGAGGATGAATCTGATGTCCTCATTGAGTGTAGAGATGTTTATAAGTCATTTGGGGAGAAGGAAATCTTGAGAGGTGTGAGCTTCAAGATTAGACATGGGGAAGCTGTTGGAATAATTGGGCCTTCTGGCACAGGGAAATCTACAGTGCTGAAGATTATGGCAGGACTTCTTACTCCTGACAAGGGAGATGTTTTCATTCGGGGAAGAAAGAGACATGGTTTGATAAGTGATGAGGAGATATCTGGCCTCCGTATTGGGCTGGTATTTCAGAGTGCCGCACTTTTTGATTCTTTGACTGTTCGTGAAAATGTTGGTTTCCTTTTGTATGAAAATTCCAACATGTCTGAGAATCAAATAACAGAACTTGTGACAGAAACTTTGGCTGCTGTTGGCTTGAAGGGAGTTGAGGATCGATTGCCTTCCGAGTTGTCTGGTGGAATGAAGAAACGAGTAGCATTAGCTCGGTCTATAATCTATGATAACACAAAGGAAGCAATAGAACCTGAGATGCTCTTGTATGATGAACCTACTGCTGGGCTTGATCCAATTGCATCTACTGTAGTTGAAGATCTAATCCGCTCTGTGCATTTGAAAGGTGAAGATGCGCTTGGGAAACCTGGGAAGATTGCATCTTATGTGGCCGTCACTCACCAACATAGTACCATAAGAAGAGCTGTTGACAGGTTGTTGTTTCTCTACGAGGGGAAAATTGTCTGGCAAGGATTGACTCATGAATTCACCACATCAACAAATCCCATCGTTAGACAGTTTGCATCTGGAAGTTTAGATGGGCCTATTAGATACTAA 1050 0.44 MSRNVVSSANSMFPPFTGYCGSSRSARFFIPSRKRLSSCFGERKIVCACSAPPRNWSDGLSAVKINEDSSILENLSAGRYVEDESDVLIECRDVYKSFGEKEILRGVSFKIRHGEAVGIIGPSGTGKSTVLKIMAGLLTPDKGDVFIRGRKRHGLISDEEISGLRIGLVFQSAALFDSLTVRENVGFLLYENSNMSENQITELVTETLAAVGLKGVEDRLPSELSGGMKKRVALARSIIYDNTKEAIEPEMLLYDEPTAGLDPIASTVVEDLIRSVHLKGEDALGKPGKIASYVAVTHQHSTIRRAVDRLLFLYEGKIVWQGLTHEFTTSTNPIVRQFASGSLDGPIRY* 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl12g00206 349 ProSitePatterns ABC transporters family signature. 224 238 IPR017871 GO:0005524|GO:0016887
Eupl12g00206 349 Pfam ABC transporter 104 259 IPR003439 GO:0005524
Eupl12g00206 349 Gene3D - 77 340 IPR027417 -
Eupl12g00206 349 CDD ABC_Org_Solvent_Resistant 89 338 - -
Eupl12g00206 349 PANTHER PROTEIN TRIGALACTOSYLDIACYLGLYCEROL 3, CHLOROPLASTIC 31 349 - -
Eupl12g00206 349 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 87 330 IPR027417 -
Eupl12g00206 349 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 89 340 IPR003439 GO:0005524
Eupl12g00206 349 SMART AAA_5 113 317 IPR003593 GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl12g00206 Eupl-Chr12 6844387 6862406 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl12g00206 95 333 Calmodulin-binding Proteins AT2G36910 28.740 5.80e-16 77.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl12g00206 - - msin:131240003 580.867