Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl12g00169 ATGGGAGACCTGAAACAAGGACCTCCTCCTCTCCATGTGGACCTCAAGGTCACCCTACGGTGTTTTTCCATGGTCTTCCCATTAGAGAAAATTGAGAGAAAGTCCATGTTTCTTTCAAACATAGACCAAGTTCTAAATTTCGACGTCAAAACGGTCCATTTCTTTCCTGCGAACCCGAATTTCCCACCAGAAACAGTCGCCAAGAAGCTTGAAAATGCATTTCGACGAGTTCTTGTACCGTACAATTTCTTGGCCGGAAGGTTGAGGTTGAACCCTCAACAGGGTCGGCTAGAGATTGACTGCAATTCAGCTGGTGCGGGTTTTGCCGTGGCTTCTAGTGAGTCGTCTTTGGCGGAGATTGGAGACTTGGTGTACCCTAATCCCAATTTTCAACAACTTATAGCCGGAAAATCAAGCCCCTTGGGTCCTGAGGATCAGCCCATATGTGTCTTGCAGGTGACGTCGTTCAAGTGCGGTGGGTTTGCTATGGGCATATCTACCAACCACATTGCATTTGATGGCATCGGCTTTAAACTCTTCTTAGAGAATCTCGCCTCCCTGGCTGCTGACAAACCTTTAGCCGTTAGTCCGTACAATAACCGTCAGTTACTAGGTGCTAGATCTCCCCCACGTGTCACCTTCTCCCACCCAGAGCTGGTAAAGTTTGAATTCCCACCATCAGAAGGAGAAGAGTCTACCAACGGAACAGTCTTCCAATCTACACAAGAGGATCTTAACTTCAAGGTTTTCCGGCTAAGCGACGACGACATTCTTGGCCTAAAAGAGAAGGCAAAGATGGGTAGCGGGGCAGGCAATGCCGGTACCTGCGGGATCACTAGCTTCAACGTCGTCACGACACACATTTGGCGATGCAAGGCCTTATCAGGGGACACAGGAAACAATCTAGAGAAGATGTCAACCATCCTCTACGCCGTCGACCTCCGATCGAGACTAACACCCCACCTCCCACCATCATACACTGGCAATGCAGTCCTCACTGCATATGCAACCACCACTTGTCGTGAACTGGATGAGGGGCTGTTCTCCCACTTGGTGCAATTGGTCTCGCAGGGAGCTGCGAGAATGACAGATGAGTATGCTAGGTCTGTCATCGACTGGGGTGAATTACATAAAGGGTTCCCACATGGCGACGTGCTCGTGTCGTCTTGGTGGAAATTAGGGTTTGCCAACGTGGAATATCCTTGGGGGAGACCTAGGTATAGTTGTCCTGTGGTAGACCATAGGAAAGATATTATCTTGTTCTTCCCTGACATTGAGGGGGTGAGCAATGAAGGGGTGAATGTTCTAGTGTCCCTCCCAAGTGAGGAAATGGAGAAATTCCAAAGCCTCTTCTACAAGTTCCTGGCATAA 1371 0.4909 MGDLKQGPPPLHVDLKVTLRCFSMVFPLEKIERKSMFLSNIDQVLNFDVKTVHFFPANPNFPPETVAKKLENAFRRVLVPYNFLAGRLRLNPQQGRLEIDCNSAGAGFAVASSESSLAEIGDLVYPNPNFQQLIAGKSSPLGPEDQPICVLQVTSFKCGGFAMGISTNHIAFDGIGFKLFLENLASLAADKPLAVSPYNNRQLLGARSPPRVTFSHPELVKFEFPPSEGEESTNGTVFQSTQEDLNFKVFRLSDDDILGLKEKAKMGSGAGNAGTCGITSFNVVTTHIWRCKALSGDTGNNLEKMSTILYAVDLRSRLTPHLPPSYTGNAVLTAYATTTCRELDEGLFSHLVQLVSQGAARMTDEYARSVIDWGELHKGFPHGDVLVSSWWKLGFANVEYPWGRPRYSCPVVDHRKDIILFFPDIEGVSNEGVNVLVSLPSEEMEKFQSLFYKFLA* 457
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl12g00169 456 Gene3D - 13 220 IPR023213 -
Eupl12g00169 456 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 24 451 - -
Eupl12g00169 456 Pfam Transferase family 15 452 - -
Eupl12g00169 456 Gene3D - 232 454 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl12g00169 Eupl-Chr12 5419933 5422818 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl12g00169 15 454 Monolignol Biosynthesis Gene Families AT5G48930 29.130 5.02e-56 190
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl12g00169 K13065 - vvi:100249378 630.172