Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl12g00167 ATGGTGGCTTCATCTTTGAGAAATAGTGCAACAAAGATAGCACCACATGCTAGCATGATCCTTGTTCAGCTCATATCTGCAACTTATATAGTTCTAAGCAAGGTTATACTAGTGGAAGGAATTAGCTCTACTGTCTATCTTGTCTACCAGTGCATATTAGCCACACTTTTCATGGCAGTTCTTGCATTTTTCATTGAAAGAAGGAGTAGGCCGCCTCTTACAAAATCAATTTTAATGTGGATTTTTCTACTAGCTTTTGTGGGGATAACCATTCCACAAAACCTTGTGGTAGGCTGCTTATATTTCATCTCTAGCACAGTAGAGGCGTCAGTTTTCAACTTGGTGCCTGTTTTTACCTACATCTTGTCCGTAATGGCAAGGCAAGAAGAGCTTGAACTGAACACATGGTGGGGTAAAGGGAAGCTCTTTGGAACCCTTTTATGTGTTTCTGGTGCTCTCACTCTCACTTTATGGCGTGGTTCATCTGTTTCTCTTCTCACCACTAGCCTGGGTGATTGGTTGCTTGGTTTGTTCATGGTCTTCTTTGGAATATTTGCATATAGTGCATGGATTTTGATGTTGAGGCCCATGATGAGGATATACCCAGCTGAGTTTTCGCTAACTACTCTAATGTTCTTCTTTGGAACATTACAAACATGTGTAGTAGCCGCAGTTGTAAGCCGTGAAGCATCCGAATGGAAGCTCCAATGGGATTTGGAGCTCTTAAGCATCGTCTTTGGAGGAATGCTGAACAGTGGGCTTGCGTACCTCTTACTAACGTGGGGAGCTTCTCTCAAGGGCCCAATATTTGTCGCTACGTTTACGCCTTTAACATTCGTGTTCACGGCGATCATGGAAACAGCATTTCTAGGGTCCACCCTGTACTTGGGAAGCATCGTTGGATCAATTGTGATAGTTGCCGGGCTCTACATTTATCTATGGTCGAAGGCAAAAGAAGAAGCACACAAATCAATGGATGGAGATGATCTTCTCATCTCTTCTCTTATCTCAAACCATTCCCCATGA 1026 0.4298 MVASSLRNSATKIAPHASMILVQLISATYIVLSKVILVEGISSTVYLVYQCILATLFMAVLAFFIERRSRPPLTKSILMWIFLLAFVGITIPQNLVVGCLYFISSTVEASVFNLVPVFTYILSVMARQEELELNTWWGKGKLFGTLLCVSGALTLTLWRGSSVSLLTTSLGDWLLGLFMVFFGIFAYSAWILMLRPMMRIYPAEFSLTTLMFFFGTLQTCVVAAVVSREASEWKLQWDLELLSIVFGGMLNSGLAYLLLTWGASLKGPIFVATFTPLTFVFTAIMETAFLGSTLYLGSIVGSIVIVAGLYIYLWSKAKEEAHKSMDGDDLLISSLISNHSP* 342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl12g00167 341 SUPERFAMILY Multidrug resistance efflux transporter EmrE 237 317 - -
Eupl12g00167 341 PANTHER WAT1-RELATED PROTEIN 15 323 IPR030184 GO:0016020|GO:0022857
Eupl12g00167 341 Pfam EamA-like transporter family 175 313 IPR000620 GO:0016020
Eupl12g00167 341 Pfam EamA-like transporter family 18 140 IPR000620 GO:0016020
Eupl12g00167 341 SUPERFAMILY Multidrug resistance efflux transporter EmrE 49 158 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl12g00167 Eupl-Chr12 5396681 5403292 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl12g00167 12 326 Nodulin-like Gene Family AT1G75500 33.134 5.45e-60 196
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl12g00167 - - nnu:104605234 565.074