Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl12g00155 ATGCCTTCTGGAACGCAACCACACCTTTCCCAATCCCAACTGAGACGGCGTAACGTTCCAGAACCCTTTGAAGACATCAATGATGAGAGTCCCTTGTTCTCTTTTACACACCCAAAAAGGCTCGCGAGAATGGTGGCAGAGGAAAACTTAGATTCTCTCCGTGAATTTGGAGGAGTCGCAGGAATAGCAGAATCTCTTCTTACGCACACAGAGATTGGTATCCGCGGAGATGATGGAGATCTGCGTCGCCGACATGATGTCTTTGGTTCAAACACCTACCTTAGTCATGGCCAGTGGCAGCCGCTACAAGCTTTATTCGTATTAATAAAATCTAAGAGTTTCCGTAGGGCCAAAGAGTTGGAGAAGTTGTTGAATGCGAGCGATAAAATCCAAGTCAAGGATACCATGGACACGCCCACATCTGTTGGCGTACATTCAAAGTCGGCTGAGACGATGAACTCTTTAGCCCGTGAATTCCACGACCTCACATCATCCATTTCTGTTCGAGAGTCAACCTCATTTCTGCTAAAGACACTACCGGCCGTATTGAGGTGGGGCTTTCGAAAAAACCAAATCAAGGAAGGGGACGATGATTCTTTCACCACCCTCGATAATCCGCGATTCCAACACATCAACCGGGAAAGCCTCACTAAACTCGTAAAAGAGAAGAATCTTGATTCTCTTTATCAATTTGGAGGAGTCCAAGGGATCAATGAGGCTTTGGAATCTGATATGAACAGAGGAATCTACGGATATGCAGAAGATATCCGCAGCCGAAAAAGAACGTTTGGCTCGAACACTCACTTGAAGTTGAGGCAACTGTTAAGGTACCTATTAAAAGCCTCACTTGATAGCAACCTTTTAAATTTCTTATCTACTATGACGGTCGTCTTGACGTTGAGTATCAAGCAAGATGGCTTGAAAAAGATGGAGTGGTTTGAGGCACTGGGCCTTTCTATTGGCTCTGTTTTCTTCCACTTTGCCTTGGCCATAGCACAAAGCAAGATCGAAGTCATTGTTGTGAGAGACGGCGAAAAGAATCGAATTTCCATCATTGATGTTGTGGTCGGTGATGTTATATATTTAAGGAAGGGCGATCTGATTCCAGCTGATGGGTTGTTCCTCAAAGGCTACCCTTTGCGAGTTGAAAATGAATGCAGTACGAATACGATTGCAGAGAACTCCAATAGCAAAAATGAAGTTGACACGCAAATGCCATTCTTGTTCGCTGGCTCGAAGGTCACTTGTGGCGGTGCCTACATGCTTGTCACAGAAAAGATTGGTTTTGTCAAATTGCTTATTCCTGTAGTGTTGCTGGGGCGTTGCTTCACTGGAAAACAAATTGATGATGACTTTGGAAGCTCTGATACGCAAGTAGATGCATTTCTTTTTTTTCTGCTAACATCACTGTTTTCTTTCATTACAACTTGGCCTTCTCTAACGGGAATTTTCCATGTTGTAACATTCATAAGCTACCACTTAATAATATCCCTGTGGAACGGGGAAGTGAAGAATGTTTCTTCAAACGGTCCATGTTTCTTGAATGAAGTTACTGCAGGTGGGGTTACTACCATCATCATTGATGAAAAAAGCATGCTGATGCAGAGCGAGATGAAGGTTGCTGAGTTTCATTTAAATGAAGAAACCATGATAATAGGCTTCTCTGGAACACCCAAAATCATTCTCGAAGCACTGCGCCATGGAGTCGGTCTAAACACACTGCCTGAGTTTTCTGGTAGCCCAATAGAGAAAGCACTACTTTCTTGGGGTGGGTTAGAGTTGGGAATGGACATAGAGGAAATGAAGCGAACTCATAATGTTCGTAGTGTACCTATCAATTCAGAGAAGAAAGTAAGTGGGTCGTTGATAAGCAAGAAAGTTGATTCTGAAAAAACTATATATGTGCACTGGAAAGGAGATGCAGAGTTGGTATTGTCTAGATGTAGGGATTACTACGAGAATGACGGGACTATGAAACGCTTGGACCGAGGTAAAAGGGTGAAAATAGAACATGTCGTTGAAAGCATGAGGGCTAATGGTCTTATATGTATGGCTCTGGCTCACAAGCAAATCAAAGAAGAGGAAGGAGAAGGAAAAAGCGGAGGAGGAGAAGGAACACAAGGAGAAATAGAAGAAGTAAAAGGAGAGGAAGGAGAAATCGAAGAAATACAAGAAGAAGGAGAAAGAAAAGAACTCACAGTGGACGAATATGGGTTGACCCTGTTAGGGATAATAGGTTTGTGTCTACCAGGGGAGGTGAAAAAGGCTGTGGAATCCTGTCAAGACATTGGGGTCAAGATCAAAATGGTATCAGAAGGTGACGTTGCCCAGGCAAAAGCCATAGCTATTGGATGTGGAATACTTGCGCCCAATCAGGGTGATCAAGATGGATTGGTAATGGAAGCTGACGCACTCCGAAACTGCCGGAAGAAAGGGAGTGGGGAAGTGGTAGATAGAATATGTGTGATGGCAAGGTCCAGCCCCTTAGACAAGCTTGACATGGTAAAGTGGCTGAAAGAGAGAGGTGAAGTAGTCGCAGTCATTGGAACAAGCACAAGTGATGTCGATGTACTACTAGAAGCCGATTTGGGATTTTCTATGGAAACTGGGAGCACCGAGGCGCTGAAAGACAACTCAGACTTCATCATTTCGAACAATAATTTTGCTGCCCTTGCCAAAACCTTGAGGTATGGGAGGCGCTTTAGTATTTTCATTCTTAAGTTTTTTGAGCTCTATATTTCAGGACAGATCCTTGCATTCGTCGGGAATTTAATAGGAGCATTTAAGTTTGGAAGAACCTTAATATCAGATCTTGACCTACTAGCTTTGAACATTGGTTTGCCTATGTTATTTGCTACTCTAGTCGAGAAGCAATTAACGGAAGAAGAGATGAAGAAGGCGCCGATCGGTCGAAGTGTATGGGAGGTAACCTGGATCAATATGGGAACCGTCGTGGCTCAAGCTCTGTTCCAGGTTGTCAGTTTGTTGATTTTGTTATTTAAAGGAGAAGCCTTTTTCGGTGGTTTTAAGGACGCAATGATGTACACGATTGTGGATCTCTCTCACTTTTTCATCATATTCTATGAGATGATTCAACAGAAGAAGAATGTGTTCAATGGGAATCATTCATTGTTGTTCTGGTTGTTATTGGGGATGCTTTCTTTTCCATTCTCGGAGGTTTCCCATTGGAGTCAGTGGATAGCGTGTATTGGAATAGCAGCGATATCTGTACTTGTTCGTTTTGGCTGCAAAATTATTACAGCCGCATGGTTTCCTGGATAA 3282 0.4327 MPSGTQPHLSQSQLRRRNVPEPFEDINDESPLFSFTHPKRLARMVAEENLDSLREFGGVAGIAESLLTHTEIGIRGDDGDLRRRHDVFGSNTYLSHGQWQPLQALFVLIKSKSFRRAKELEKLLNASDKIQVKDTMDTPTSVGVHSKSAETMNSLAREFHDLTSSISVRESTSFLLKTLPAVLRWGFRKNQIKEGDDDSFTTLDNPRFQHINRESLTKLVKEKNLDSLYQFGGVQGINEALESDMNRGIYGYAEDIRSRKRTFGSNTHLKLRQLLRYLLKASLDSNLLNFLSTMTVVLTLSIKQDGLKKMEWFEALGLSIGSVFFHFALAIAQSKIEVIVVRDGEKNRISIIDVVVGDVIYLRKGDLIPADGLFLKGYPLRVENECSTNTIAENSNSKNEVDTQMPFLFAGSKVTCGGAYMLVTEKIGFVKLLIPVVLLGRCFTGKQIDDDFGSSDTQVDAFLFFLLTSLFSFITTWPSLTGIFHVVTFISYHLIISLWNGEVKNVSSNGPCFLNEVTAGGVTTIIIDEKSMLMQSEMKVAEFHLNEETMIIGFSGTPKIILEALRHGVGLNTLPEFSGSPIEKALLSWGGLELGMDIEEMKRTHNVRSVPINSEKKVSGSLISKKVDSEKTIYVHWKGDAELVLSRCRDYYENDGTMKRLDRGKRVKIEHVVESMRANGLICMALAHKQIKEEEGEGKSGGGEGTQGEIEEVKGEEGEIEEIQEEGERKELTVDEYGLTLLGIIGLCLPGEVKKAVESCQDIGVKIKMVSEGDVAQAKAIAIGCGILAPNQGDQDGLVMEADALRNCRKKGSGEVVDRICVMARSSPLDKLDMVKWLKERGEVVAVIGTSTSDVDVLLEADLGFSMETGSTEALKDNSDFIISNNNFAALAKTLRYGRRFSIFILKFFELYISGQILAFVGNLIGAFKFGRTLISDLDLLALNIGLPMLFATLVEKQLTEEEMKKAPIGRSVWEVTWINMGTVVAQALFQVVSLLILLFKGEAFFGGFKDAMMYTIVDLSHFFIIFYEMIQQKKNVFNGNHSLLFWLLLGMLSFPFSEVSHWSQWIACIGIAAISVLVRFGCKIITAAWFPG* 1094
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl12g00155 1093 Pfam E1-E2 ATPase 335 385 - -
Eupl12g00155 1093 Gene3D - 538 747 IPR023299 GO:0000166
Eupl12g00155 1093 SUPERFAMILY HAD-like 735 896 IPR036412 -
Eupl12g00155 1093 SUPERFAMILY Calcium ATPase, transduction domain A 337 424 IPR008250 -
Eupl12g00155 1093 Gene3D - 748 892 IPR023214 -
Eupl12g00155 1093 PANTHER CATION TRANSPORTING ATPASE 518 1087 - -
Eupl12g00155 1093 Gene3D - 328 429 - -
Eupl12g00155 1093 MobiDBLite consensus disorder prediction 693 727 - -
Eupl12g00155 1093 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 537 695 IPR023299 GO:0000166
Eupl12g00155 1093 SUPERFAMILY Calcium ATPase, transmembrane domain M 231 1092 IPR023298 -
Eupl12g00155 1093 Coils Coil 706 733 - -
Eupl12g00155 1093 Pfam Cation transport ATPase (P-type) 576 650 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl12g00155 Eupl-Chr12 5026751 5030486 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl12g00155 38 93 Primary Pumps ATPases AT5G57110 44.643 7.44e-08 55.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl12g00155 K01537 - nnu:104598680 475.322