Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl12g00150 ATGGAAACACAGTGCGAGAAACCGAAGGAGAAATTAAAAGATATACGAATGGAACGTAAAAACCAAAATATGGGCAAGGGTGTAGCTTCATATGAAGATAACAATGAACATCTTTATAATTATGTTGAAGGCAATGAGGAAGATTGCAGTTCTTTTGATGGGGATGAAGGGACCTTTGATAATGTTGAAAGCAATAAGAGAGGAACTATCGGAGGGGAGGAGGGTAATGAAGAAGTGGATGACACTATTAGCAATAAACAATTGGAAGACTTTCGGGAAGATGGGATGAATGAGCTCTGTCCACGCGTCGGCATGGAATTTGGATCCCAAGAAGAAGCATACAGTTTCTACAATCTGTATGCAGGAAACATGGGATTTAGTGTTCGTAAGTACTCAAGCAATAAGTCCCACCGCACCCATGATATAATAGGTCGCACTTTTTGTTGTTCACTTGAAGGGTTTCGTGATCCTCGATCTAAACGTTTTGAAGAAAGAACAAGGAATCGAGCTAATACAAGAACGGGTTGCAAAGCAATGTTGTCCATAAGAAAAAGAAAGGAAGATAAATGGGTTGTGACTCGAGTTGTAGAGGAGCACAATCATAAATTTGTGACTCCAAGCAACAAACATAAGCTTCGGTCCATAAGAAAAATAGTTGAAGGTCAAAGGCGCGTACTTGAGAACATGCTTTTAGCGGGGTCCAAAACAAATCTTATGATGAGCTCCATGGCTCTTGAAGTTGGGGGAAGTCATAACATTGGCTTCACAGAAAGGAACTTCTTGAGTACAAAACGGCAAAGGGAGCTTAGAAAGGAAGATGCAGAAGCCATACTTGATTACTTTGAGCGTCAACAAATGGAGAATCCATCATTTTTTTATTCAATTCAGGTTGACTCTGAGTGTCAGATGACGAATTTTTTTTGGGCTGATGCTAGGTCCAGGATGGACTACCACCACTTTGGGGATGTTGTCTGTTTTGATCCTACATATGGAACAAACAGATATGGCATGCCATTTGTCCCAATAGTAGGCATTAATCATCATTGTCAGATAGTGTTATTTGGTGGTGCATTGCTATATACTGAAACAGAGGAGTCTTTTGTATGGTTAATGAAGACATGGATGATGTCAATGAATGGTAAGCAACCGAAGGTAATTCTTACTGATGAAGAATCTGCAATTGGAAGAGCTATCGAATGTGTGTTGCCTGGTACTCGTCACCGGTATTGTTTGTGGCACATAACAAAAAATGCAATGAAGAATATACCTCAAGCAGTTAATGCACATAAAGGTTTCATTCATGATTTTAACAATTGTGTGTATGGCAATGAGGCGGTTGAAGAGTTTGAGTCAAATTGGAAAGCGATGCTTAAGAGGTACAACTTGGGGGATAATAGTTGGCTAAATAAATTATTTGACAAGCGAGAAAAATGGGCATCAGTTTACACACGTGACATATTTTGTGCAACCATGTATACAACTCAGTGTGGCGAAAGTATAAATGCTTATTTCAATGGGTACCTGAAAAGAAGTATGCCTCTATCCGAATTTGTCAAGCAATATGAAAGAGTAGTAGTAAAAAGGCGAGAGCAAGAAAATAATGAAGACTTTGAAACAAACTATAAAGTGCCAGTTTTGAGGTTTTCAATGGAAATTGAGAAGGAGGCAGCTAAAGTTTACACAAGAGCAATCTTTCAGAAGTTTCAGGATGAACTATATGAAAGTCTTTCGTACCGCCATAAAAAAGTTGAGGAGATTGGAACAAAGTCCATGTATCATGTGTGGAAGATGGAACATGAACAAGCATTGCGTACTGTCACATTCAATTCTTCTGACACAAGTTACAAGTGTAGTTGTCAGTTATTCGAATTTGCTGGCTACTTGTGTAGACATATCTTGAAGATTTTTGTTGTTTTGGATGTTCAGAACCTTCCACCGCAGTACATACTAAAAAGGTGGACAAGAGATGCAAAGTTCGGACCTGTGGTGGACGATCAGGGTGAAGACATGCGAGTTGATTGCCACGAGACTGTTACAGTTCGATATAACAAGCTTTTTCAAGAGGCAGTTAATGTTGCAGCTAAGGGTGCTACGTCTATTGAAGTGTACAATGTGGCGATGCGTGGTCTACATAACACTTTAAAAGAAGTAGAAACTGCACTAAAAAATGTAACAAATAGTCCCAAGAAGCCCAACAAAGAAGTTGGAAGTGGCCATGGTGACAAAATAAGTCAAGTGAGTTTAGGAAACCCTCCGGACAATCAAAGGCCATTGCCCGATCCACCAATTGCGAAGCATAAAAAGAGAAGCATGGAGCCATGGATTGATAAGCTATCTAAAAACAAGAAGGGCACCATTCAAAATACACATGAAAATTCTCTGGATTTGGTCAGTCAACAAAACTCAGGTACAGTAACCAATGAGATGCTCCATGAGACACGAAGAAGAAGAGGGAAAGTGGGAAAAGGCCTGCAAACCTCGATTGCAGTAACCAATGATCAACCTAAGAGTGTTATACAGCCTCCAGATCCATTAGGAGGTCATCAATCTGCGAATTTGGTCAGTTCATATCTCTTATCAAATTGTGGCAACAATCTATGTTATCCATCCAGCTCCAGTGATCTTCAGTTTAGTTTAAGTCAGGGTTCCTATGTGACTGGTATGCAACCGTCTCCAGTTATGCTTGATCACCAACTTCCTCATTTGAGTCAGGAATCCTCGGTGGCTGGACAACAAGGAACACCACTAGTAATCCCCCGTCGTGATGATATCACAGGTAGTAGTTTCCATATACAACGGCACGATGGTGCTTCCACTGCTGGAATTTATCACTTCGGGCAGGGAACCATTCCGCCTTATGTACGGAATCCACACCAACCTCATGGAAACACTAATATCGATCTTAATGATTTGAATAAGCCAAGTTAG 2928 0.4033 METQCEKPKEKLKDIRMERKNQNMGKGVASYEDNNEHLYNYVEGNEEDCSSFDGDEGTFDNVESNKRGTIGGEEGNEEVDDTISNKQLEDFREDGMNELCPRVGMEFGSQEEAYSFYNLYAGNMGFSVRKYSSNKSHRTHDIIGRTFCCSLEGFRDPRSKRFEERTRNRANTRTGCKAMLSIRKRKEDKWVVTRVVEEHNHKFVTPSNKHKLRSIRKIVEGQRRVLENMLLAGSKTNLMMSSMALEVGGSHNIGFTERNFLSTKRQRELRKEDAEAILDYFERQQMENPSFFYSIQVDSECQMTNFFWADARSRMDYHHFGDVVCFDPTYGTNRYGMPFVPIVGINHHCQIVLFGGALLYTETEESFVWLMKTWMMSMNGKQPKVILTDEESAIGRAIECVLPGTRHRYCLWHITKNAMKNIPQAVNAHKGFIHDFNNCVYGNEAVEEFESNWKAMLKRYNLGDNSWLNKLFDKREKWASVYTRDIFCATMYTTQCGESINAYFNGYLKRSMPLSEFVKQYERVVVKRREQENNEDFETNYKVPVLRFSMEIEKEAAKVYTRAIFQKFQDELYESLSYRHKKVEEIGTKSMYHVWKMEHEQALRTVTFNSSDTSYKCSCQLFEFAGYLCRHILKIFVVLDVQNLPPQYILKRWTRDAKFGPVVDDQGEDMRVDCHETVTVRYNKLFQEAVNVAAKGATSIEVYNVAMRGLHNTLKEVETALKNVTNSPKKPNKEVGSGHGDKISQVSLGNPPDNQRPLPDPPIAKHKKRSMEPWIDKLSKNKKGTIQNTHENSLDLVSQQNSGTVTNEMLHETRRRRGKVGKGLQTSIAVTNDQPKSVIQPPDPLGGHQSANLVSSYLLSNCGNNLCYPSSSSDLQFSLSQGSYVTGMQPSPVMLDHQLPHLSQESSVAGQQGTPLVIPRRDDITGSSFHIQRHDGASTAGIYHFGQGTIPPYVRNPHQPHGNTNIDLNDLNKPS* 976
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl12g00150 975 MobiDBLite consensus disorder prediction 1 21 - -
Eupl12g00150 975 SMART 26again6 615 642 IPR006564 GO:0008270
Eupl12g00150 975 MobiDBLite consensus disorder prediction 1 31 - -
Eupl12g00150 975 MobiDBLite consensus disorder prediction 56 80 - -
Eupl12g00150 975 Pfam MULE transposase domain 323 417 IPR018289 -
Eupl12g00150 975 Pfam SWIM zinc finger 616 636 IPR007527 GO:0008270
Eupl12g00150 975 ProSiteProfiles Zinc finger SWIM-type profile. 604 640 IPR007527 GO:0008270
Eupl12g00150 975 MobiDBLite consensus disorder prediction 723 772 - -
Eupl12g00150 975 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 95 718 IPR031052 GO:0006355
Eupl12g00150 975 Pfam FAR1 DNA-binding domain 115 204 IPR004330 -
Eupl12g00150 975 MobiDBLite consensus disorder prediction 958 975 - -
Eupl12g00150 975 MobiDBLite consensus disorder prediction 955 975 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl12g00150 Eupl-Chr12 4827555 4846800 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Eupl12g00150 MULE 9.5e-28 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl12g00150 - - nnu:104588826 981.859