Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl12g00141 ATGCAAGGCGATCTTAGTATAGCTTACAGGAGGGATGTTGAAAAATGGGTTGTTGCCAACTTTGTAAGAGGGCATAATCACGAGCTGATGGTTCCTAGCGAAGTTCCAGTGCGACAATCATCAGTCAAGGCACACAATGAGTGTTTGCGACAGACGTGCCTGGGAAGTTATGTTGACTCCCAATGGTGTATCCAACTTGGGCCAATCACCAACCTGATCCATGATTCTAAAGTTCTGACCCACAAACTACCGCACTTTTTGGACAGTCACACAATCACTGATGCTGTAGCCTTTGTGGTTAATAAATACAATACCACCTCGGTGCAAACCACTCAACCCAAGCCTAACCCAATCCCAACTCGTCGGGTTAGTCAGGTTGGTTGGGAGGGAGAGGGGGAGGGAGGGAGGGTTGGGTTGCCTGAAGCCTCAATCCGAGACCAACCCAAATCAACCCAAGCTGGGGTAGTGGGTCCAAAGGTTCACACATTTCACCATCGCAGCATCTCCACGTGTCAAGTTTTAGCTCAATCTGCCAGCCTAAGGCCCAGAACAAGCAGAATCGAGATGGATGTCCATTCCCTTGTGGGTGATGATGACGATGAAATGATAGAAAATACCATTGGAAGGGACCTTCATGATGGCCAAATGATAGAGACATCCATCATAAGTGTGGAACCCATACGTGTGGGTGAAGATGGTGGTGAAGTGATAGAAGACCTTAGTGGAACGGGGTTGATTTCATCTTATGAAGGAGATGCTTTAAATCTAGAACCATATGAGGGTATGGAGTTTGAATCCGAAGAGGCTGCAAAGGAATTCTATGATGCTTATGCTAGGCGTGTTGGCTTCATCACCCGTGTCAGCACATATTGTCGTTCAAAGATTGATGGGGCTGTTATATCACGACGGCTCGTGTGTAACAAAGAGGGCTTTAAGAAAGGGAAAATTAAGAGGCCGATGGCAGTCACAAGGGAAGGTTGTAAAGCTATGATCAATTTGAAGAGGCAAAAACCTGGGAAATGGGTTATTTCGAAATTTGAGAAGGACCACAATCATCCACTATTGATATCTTCCAAGGTCCGCCGTGGTTCTCTTCAGAATAGATCTGCGGAGGATGCGAAGAAAATCCGGGAATTGTCATATGCGTTGCATCGTGCAAACCAACGCTGTGCAGTATATAGGGAACACCTGGACATGGTTCTGAAAGACATTGAGGAACACACATGCCATATATCTGAAAAAATTCAAGACGTAGTTCATAGTATAAGAGAACTTGAATCTCAGGAGCAACAGCATTCACAGCATAGACAACAGTTTTAG 1320 0.4561 MQGDLSIAYRRDVEKWVVANFVRGHNHELMVPSEVPVRQSSVKAHNECLRQTCLGSYVDSQWCIQLGPITNLIHDSKVLTHKLPHFLDSHTITDAVAFVVNKYNTTSVQTTQPKPNPIPTRRVSQVGWEGEGEGGRVGLPEASIRDQPKSTQAGVVGPKVHTFHHRSISTCQVLAQSASLRPRTSRIEMDVHSLVGDDDDEMIENTIGRDLHDGQMIETSIISVEPIRVGEDGGEVIEDLSGTGLISSYEGDALNLEPYEGMEFESEEAAKEFYDAYARRVGFITRVSTYCRSKIDGAVISRRLVCNKEGFKKGKIKRPMAVTREGCKAMINLKRQKPGKWVISKFEKDHNHPLLISSKVRRGSLQNRSAEDAKKIRELSYALHRANQRCAVYREHLDMVLKDIEEHTCHISEKIQDVVHSIRELESQEQQHSQHRQQF* 440
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl12g00141 439 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 210 430 - -
Eupl12g00141 439 Pfam FAR1 DNA-binding domain 272 355 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl12g00141 Eupl-Chr12 4680382 4702892 Dispersed/Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Eupl12g00141 FAR1 8.3e-28 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl12g00141 - - nnu:104608815 365.925