Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl12g00139 ATGGAGATCAGCTTTGGTCAAGGATTTGATTTAGATGAAAGCGACAAGGGTTTGCAAGATGAAACATTTGATGAACATGAAACAACGGAAGATGAGCTCTCGAAGAATTTGGATTCATCTTCAAGTGGAAATGACAAGATGATAGTAGAGTCCATTGAAAACTTACAAGAAAATGTGGAAGGTTTAGAACCATATCTTGGCTTGGAGTTCAAATCAAGAGATGATGCTAGGGAATTTTATGTTTCATATGGCAGGCGTATGGGTTTCACCGTACGCATTCATCATAATCGCCGTTCACGAATAAACGGGGCAGTTATCAGTCAAGATTATGTTTGTTCAAAAGAAGGTTTTCGTGCAAAAAAGTATGTGTATAGGAAAGATAGAGTTCTTCCTCCGCCGCCGGTCACCAGAGAAGGATGTCATGCAATGTTAAGGGTAACTCTAAAGGATGGGGGAAAATGGGTTGTTACCAAATTTGTAAGAGATCACAGCCACAAACTAATGAGTCCAAGTAAAGTTCCACTGCGGCGATCAGATAAGATTTTACTTAGCGAGGATGACAAGGATAGGAGAATTAGAGAATTGTCCCTCGAGCTGTACAATGAGAAACGAAGATGTGAACGGCGGTGTGCAGCATATCAAGAACAGTTGAAAATGGTTTTGAAAGATATCGAGGACCACACTGAGCACCTGTCAAAAAGAGTTCAAGATATAGTTCGGAGTGTAAGAGAAATTGAAGATCAATAG 747 0.4016 MEISFGQGFDLDESDKGLQDETFDEHETTEDELSKNLDSSSSGNDKMIVESIENLQENVEGLEPYLGLEFKSRDDAREFYVSYGRRMGFTVRIHHNRRSRINGAVISQDYVCSKEGFRAKKYVYRKDRVLPPPPVTREGCHAMLRVTLKDGGKWVVTKFVRDHSHKLMSPSKVPLRRSDKILLSEDDKDRRIRELSLELYNEKRRCERRCAAYQEQLKMVLKDIEDHTEHLSKRVQDIVRSVREIEDQ* 249
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl12g00139 248 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 20 246 - -
Eupl12g00139 248 MobiDBLite consensus disorder prediction 1 44 - -
Eupl12g00139 248 MobiDBLite consensus disorder prediction 13 34 - -
Eupl12g00139 248 Coils Coil 203 223 - -
Eupl12g00139 248 Pfam FAR1 DNA-binding domain 78 168 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl12g00139 Eupl-Chr12 4637679 4645559 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Eupl12g00139 FAR1 7.4e-26 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl12g00139 - - nnu:104605195 390.963