Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl12g00131 ATGAGAGGTCTTCCCCTCGCTCCATCTCTCTCTCTCTCTGACGACGAAGAGGATCTGGGTTTCTCGGGTTTGATCTCAGACGTGAAATTGATGGATTTGGAAACTCGTCTTGATGAAGGATGTGGAACGATAGAAAATTCTGGCGGAGGTGAGTTAGTTGCATGTGAAGGAGAGGAAGTTCTAGAACCATATGAGGGTATGGAATTTGATAATGAAGATGCTGCCAAGGCATTCTATGATGACTATGCTAGACAGGTAGGATTTGTCATCCGTGTCAAGTCTTGCCGTCGTTCAGAGGTTGATGGAAGAATTCTTTCCCGCCGACTTGTATGTAATAAGGAAGGCTTCTGTGTTAGTGTTAGAGGAAAATTTGGGCCGGTTCGAAAGCCGCGAACAAGCAATCGAGAAGGTTGCAAGGCAATGGTTCTGGTAAAGATAGAGAAATCCGGAAAATGGGTTGTTACGAGATTTGTAAAGGACCATAATCATCCACTGGTAGTTTCCGCCCGTGAGTGTCGCCACACTATGGATGAGAAGGATAAGAAAATTCAGGAACTAACTTCAGAGCTGCGGCGTAACAAACAATTGTTGGCAGCATATCGAGAAAAGCTACGTATGTTTATGAAAGATGTCGAGGAACACACTGAACAGCTATCAACAAAAGTTCAAGTTATAGTTGAAAATATCAGAGAGGCTGAATCTGAAGATCAAGAACTTTAA 720 0.4333 MRGLPLAPSLSLSDDEEDLGFSGLISDVKLMDLETRLDEGCGTIENSGGGELVACEGEEVLEPYEGMEFDNEDAAKAFYDDYARQVGFVIRVKSCRRSEVDGRILSRRLVCNKEGFCVSVRGKFGPVRKPRTSNREGCKAMVLVKIEKSGKWVVTRFVKDHNHPLVVSARECRHTMDEKDKKIQELTSELRRNKQLLAAYREKLRMFMKDVEEHTEQLSTKVQVIVENIREAESEDQEL* 240
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl12g00131 239 Pfam FAR1 DNA-binding domain 78 166 IPR004330 -
Eupl12g00131 239 Coils Coil 169 235 - -
Eupl12g00131 239 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 46 236 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl12g00131 Eupl-Chr12 4379490 4400777 Dispersed/Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Eupl12g00131 FAR1 7.1e-29 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl12g00131 - - tss:122647667 353.984