Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl12g00116 ATGCTTCTTTATCATGAGAGGACATCTAGGCCACCATTTTCGGTTAGAGGCTCTCTTGATTCTCTATGGGGTAGGGTTTTTGCTGAGTCAGTCAGGGAGGCTGTTGAACTAGCGGGAACCAACAGGCCTTTCGAGATTATCTATTATCCAAGGGCGGGGTTACTGGACTTCATTGTGGAAGCACAGACGGTTGAGGAATCGAGAAGGTTTTGGAAGGCTGGGATGAGGGTTAAAATGTCAGTGAAGACAAAGGACTCGTCTAGGATGACATGGTACCACGGGACAGTTTCTTCCGCTGCAGTTCCAGATCACGGGCCATGGTTACTTGGGATGAGCCTGAAGTTATGGAGAATGGTTGCAGGCATACCACCACTTCAGACACCATTCCCCCCAATGAAGAAACTCAGAGTTCCCCAGACTCCTGAGTTGCCGACTGATGGAGAAGGGAGCATGTTGTTTCCCATGACGGGATTAACTAATTCAATGATGGGGCACTTGGAGGACCCTTCATTGTTTAGTTATACCACTTTTCCTGCTGGCATGCAGGGAGCCAGGCATGATTTTTCCAACTTTGTAGCTAATAATAGTACCCATCAAATGTTGTACTCTGACCATCTCTATGGAAACATGGCACCGAAGTTGAATTCAGTGTCTACCGAACTGACCATTGGGATGAGTACATCACAATCCAACAAGTCATTGAAGCATTGCCCGGGAAGTAGCACAGAGCTTCCTGGCAACTGA 744 0.4758 MLLYHERTSRPPFSVRGSLDSLWGRVFAESVREAVELAGTNRPFEIIYYPRAGLLDFIVEAQTVEESRRFWKAGMRVKMSVKTKDSSRMTWYHGTVSSAAVPDHGPWLLGMSLKLWRMVAGIPPLQTPFPPMKKLRVPQTPELPTDGEGSMLFPMTGLTNSMMGHLEDPSLFSYTTFPAGMQGARHDFSNFVANNSTHQMLYSDHLYGNMAPKLNSVSTELTIGMSTSQSNKSLKHCPGSSTELPGN* 248
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl12g00116 247 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 31 107 IPR044835 GO:0003677|GO:0006355|GO:0009725
Eupl12g00116 247 Pfam Auxin response factor 34 107 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
Eupl12g00116 247 Gene3D - 71 118 - -
Eupl12g00116 247 MobiDBLite consensus disorder prediction 227 247 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl12g00116 Eupl-Chr12 4074862 4077911 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl12g00116 24 221 B3 DNA Binding Superfamily AT1G77850 37.391 5.61e-34 127
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl12g00116 - - nnu:104612061 244.973