LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Eupl12g00093	ATGATCTCGTGGTTTTCTGTCTTTCTTGGATACGGCAATTGTACTAAGCATTTCAATTTTGTTACTTTGCAGCCAAAGCAAATCCACGAGATTAAGGATTTTCTTCTCACGGCAAGAAGGAAAGATGCACGATCTGTCAAGATCAAGAGGAGCAAGGATGTGGTCAAGTTCAAGGTCCGCTGCTCCAAGTACCTATACACGCTCTGCGTGTTTGACTCAGAGAAAGCCGAGAAGTTGAAGCAATCTCTTCCTCCAGGTTTGAGTGTGCAAGACCTGTGA	279	0.4444	MISWFSVFLGYGNCTKHFNFVTLQPKQIHEIKDFLLTARRKDARSVKIKRSKDVVKFKVRCSKYLYTLCVFDSEKAEKLKQSLPPGLSVQDL*	93

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Eupl12g00093	92	PANTHER	60S RIBOSOMAL PROTEIN L38	25	91	IPR002675	GO:0003735\|GO:0005840\|GO:0006412
	Eupl12g00093	92	FunFam	60S ribosomal protein L38	24	92	-	-
	Eupl12g00093	92	Pfam	Ribosomal L38e protein family	25	91	IPR002675	GO:0003735\|GO:0005840\|GO:0006412
	Eupl12g00093	92	Gene3D	-	24	92	IPR038464	-

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Eupl12g00093	Eupl-Chr12	3408108	3410331	Dispersed/Wgd

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Eupl12g00093	25	92	Cytoplasmic Ribosomal Protein Gene Family	AT3G59540	94.118	7.88e-43	132

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Eupl12g00093	K02923		-	egr:120292773	135.961

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