Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl12g00092 ATGTCTGATCCCAATAGGGCGGAGAGTTCAAAGCAAGGTAAAAAGAGAGTAGAAAAAATGAAAAATGCAACTCATGTTGCTATGACTAGAAATCCCAATAGTGGAATAAATATCTCTGATCAACAGGCTAATCATCAGCCCCTAGCACGAAGAACACGACAAGCTATTAGAGAACTTCATTTTGAAGAAGTAGTTGAAGAACGAGATGATTGCAACAACAATGCACTACAAGGAAATTCACCAACAATAGAAAGAGGATCAAATGACCCAAGAAATGATAAAGATGTCCCAACTACAACTTCCACAGAAAACTTGCCAAATGCCTCTATAGGTGGATCATCTCAACAATCCAAGAAAAGAGGACCTTCTAAATGTAAAACAGTCGCGACAGATTGCAACAAAAGGCTGGTGGTTACATTTAATGAGAGAGGCCAACCTATTGATGACGCATCTGTAAAAATGGTTTCTTTTTTGGGAACTTTGGTACGGGAGATGGTTGACATAACCGTTGATGATTGGAGGAGAATTTCTATGGCAACAAAAGATAGGTTATGGGAAGCAATCAAGCAAAAATTTGTCCTGGAAGAGCATTCGAGGAATTTTATCATGAGGGAGTCAGGCTACCTATGGAGGAATTATAAATCAAGTTTGACTCAGATAGTAGATTCTTATGAGAATGAAGCTGATAAAATTGCTGCCAAGCCAAATAGATTAACCTTGAACAATGGAAGACCTTTGTACGAAAAAAAGCATCAAAAGAATCCAAAAGTCGATGTTTGGGAAATGGCACATTTAAAGAAGAATGGTGAACCAACCAACACGGCAGTTGCTGAGACAATAAAAAATATAAAAGATTTTAAAGAATTATCAACTTGGTCCTCTTCCTCATCTCTCAAAGACGATGCTCTCTCACATGTGCTTGGAGCTGAACGACGTGGTCGAGTTCGAGGAGTTGGATTTGGAGTAACTCCATCTATCTTAGGTGTCATGTCACAAAGTCAAGGAAAGGTAGCCCAACTAGAACAACAAGTGAGTGAGCTAATGCAAGAAATGCAAGAACAGAGGAAATCTATGCAAAATTTAATCAATCTAATGCTAACTCAGGCAAGTAGTAAATGTAGAAAGTTAATTAGTTATGAAATTGTGCTACCAGACAGAGCTCTCTATTTGATACCCATCGAGGATGCTGAGTACAAAGATGGCAAGATTGAATGGTCGATCGATTTCAGATCTTATGTCACCAAGCGTAACATGACAAATGCTGTTCAAGCATGCATTACTAAACATCTGGAGCTACTATCTGTCGATTTTGCTATACTAAACCTATGCCAAGAAAAACAAGAGATCGCTGGAAAAGTGCATGCCATCATCGACAAATTTGCAGAAAGGGGGTTGCGCTCTCTCGGGGTTGCTTGCCTCGTGATCAATTGGCAATTGCAAAGGAGACAGGCTGACGTCTTGGCATGGAAACAAACATGTATCCCTCTTCATCATTGCTGGGCTGTGATAGAGATGAACATGAAGCTCTCATCGAAAAGGTAG 1542 0.3969 MSDPNRAESSKQGKKRVEKMKNATHVAMTRNPNSGINISDQQANHQPLARRTRQAIRELHFEEVVEERDDCNNNALQGNSPTIERGSNDPRNDKDVPTTTSTENLPNASIGGSSQQSKKRGPSKCKTVATDCNKRLVVTFNERGQPIDDASVKMVSFLGTLVREMVDITVDDWRRISMATKDRLWEAIKQKFVLEEHSRNFIMRESGYLWRNYKSSLTQIVDSYENEADKIAAKPNRLTLNNGRPLYEKKHQKNPKVDVWEMAHLKKNGEPTNTAVAETIKNIKDFKELSTWSSSSSLKDDALSHVLGAERRGRVRGVGFGVTPSILGVMSQSQGKVAQLEQQVSELMQEMQEQRKSMQNLINLMLTQASSKCRKLISYEIVLPDRALYLIPIEDAEYKDGKIEWSIDFRSYVTKRNMTNAVQACITKHLELLSVDFAILNLCQEKQEIAGKVHAIIDKFAERGLRSLGVACLVINWQLQRRQADVLAWKQTCIPLHHCWAVIEMNMKLSSKR* 514
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl12g00092 513 MobiDBLite consensus disorder prediction 26 49 - -
Eupl12g00092 513 MobiDBLite consensus disorder prediction 70 126 - -
Eupl12g00092 513 Gene3D - 413 489 IPR023299 GO:0000166
Eupl12g00092 513 MobiDBLite consensus disorder prediction 1 49 - -
Eupl12g00092 513 MobiDBLite consensus disorder prediction 93 123 - -
Eupl12g00092 513 PANTHER OS10G0409366 PROTEIN-RELATED 68 331 - -
Eupl12g00092 513 Coils Coil 330 368 - -
Eupl12g00092 513 MobiDBLite consensus disorder prediction 8 23 - -
Eupl12g00092 513 MobiDBLite consensus disorder prediction 72 86 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl12g00092 Eupl-Chr12 3337240 3354543 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl12g00092 439 471 Primary Pumps ATPases AT1G17260 72.727 2.07e-08 55.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl12g00092 - - pper:109946275 152.91