Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl12g00077 ATGGGGAAGAAAGGGAGTTGGTTGTCTGCAATCAAGAGGGTTTTCATACCCAACTCTAAAGAGAAGCTAGTCAGTGGATCAGAAAAGAAAAGCACCAAAGAAAAGAAGAAATGGGGATTAGGGAAGCTAAGGCATGGAGAGAGCAATTCGTTCATTCCTCTCCACAGAGAACCAAGCAGTATCGAAAAAATACTGGGGGATGCCGAAAGGGAGAAACAGAAGAAGCATCCAGAATCTTCTTCCGAGCAACGGAGGACACCTTCCATCCCTTCCACGCCTTCCATGTCTTCTATGCCTTCGATGCCTTCGATACCTTCCGTGTCTTCCATGCCTTCCACGCTTGTTCATCGCCATAAAGAAGTTAACTACAATCCGCCAGTACCCCCTCCAAAGAATTACCATGTTGCAGCCATCAAACTCCAATCAGCCTATAGAGGTTATATGGCTAGGAGGAGTTTCAGAGCTCTAAAGGGTCTTGTGAGACTTCAGGGAGTGGTGAGAGGGCAGAGCGTGAAGCGGCAGACCATGAACGCAATGAAATACATGCAACTCCTTGTGAGGGTTCAATCCCAGATACAGTCAAGGAGGGTCCAGATGTTGGAAAATCAAGCTTTGCAACGCCAAAATCCATTCAAGAATGACAAGGACCTGGAGAATAGCTTGGGCAGATGGACCTTGACTCAACCATCCGAAACAGGTAACCAAGGAGAATGGGATGATAGCTTGCTCACCAAAGAGGAAATAGATGCAAGGATGCAAAGGAAGGTGGAAGCTGTCATCAAGAGAGATAGAATGTTTACCTATGCTTATAACCACCAGTTGTGGAAATCTACTCCTAAATCAGCTCAGACAGGTCTAATGGATATCAGGTCTGGAGGGTTCCCTTGGTGGTGGAGTTGGATAGAACGACAACTACCAGGAAATCCTTCAGAAAGCCAAGCCACACATGTGAAGAACGATCTAGCAACTCCCAAGTCTATTATGGCGGAGTCAGATGCACGCCCCCAATCGAGCAACTATAAGCAACCAATTAGGTTTGGATTCGACAATCCCGACATACTTACGCCAAGATCTTCGAAATCATCGATGGCTACGACGAAAACAAGGCACGTACCGATGCCATCACGTAGAGTATCACAGACACAAAGCTCAACCCCAGTGAGGAATTCAAGAACAAGGACCAGTGGAAACGAATTTTCATTCGATGTGCCGTTAAGGGACGACGATAGCCTAACAAGCTGCCCGCCGTTTTCGGTACCGAATTACATGGTGCCTACTGTTTCAGCTAAAGCGAAAGTGAGAGCTCATAGCAATCCGAGAGAGAGGTTAGCAACACCTCCACCTCCAAGTCGCGACGACAAGAAGCGGCGTTCGTTTCCCTTGACTCAGACCATTGGGTCTCTAAGGTGGAACAAACCATCCTTGTTCTCAAGAAAGGATTCTAGCTCTCAGAGGACATTAGGGCAGAACAACTCTGTGCATTCTATAGGTAATGTGAGTATGGATTCCACCGTTTCTTTGCCTGTTGGAGTTGGAAGGAGGCTATTCAAGTGA 1554 0.4698 MGKKGSWLSAIKRVFIPNSKEKLVSGSEKKSTKEKKKWGLGKLRHGESNSFIPLHREPSSIEKILGDAEREKQKKHPESSSEQRRTPSIPSTPSMSSMPSMPSIPSVSSMPSTLVHRHKEVNYNPPVPPPKNYHVAAIKLQSAYRGYMARRSFRALKGLVRLQGVVRGQSVKRQTMNAMKYMQLLVRVQSQIQSRRVQMLENQALQRQNPFKNDKDLENSLGRWTLTQPSETGNQGEWDDSLLTKEEIDARMQRKVEAVIKRDRMFTYAYNHQLWKSTPKSAQTGLMDIRSGGFPWWWSWIERQLPGNPSESQATHVKNDLATPKSIMAESDARPQSSNYKQPIRFGFDNPDILTPRSSKSSMATTKTRHVPMPSRRVSQTQSSTPVRNSRTRTSGNEFSFDVPLRDDDSLTSCPPFSVPNYMVPTVSAKAKVRAHSNPRERLATPPPPSRDDKKRRSFPLTQTIGSLRWNKPSLFSRKDSSSQRTLGQNNSVHSIGNVSMDSTVSLPVGVGRRLFK* 518
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl12g00077 517 Pfam IQ calmodulin-binding motif 135 154 IPR000048 GO:0005515
Eupl12g00077 517 MobiDBLite consensus disorder prediction 354 399 - -
Eupl12g00077 517 MobiDBLite consensus disorder prediction 23 43 - -
Eupl12g00077 517 MobiDBLite consensus disorder prediction 83 112 - -
Eupl12g00077 517 ProSiteProfiles IQ motif profile. 133 161 IPR000048 GO:0005515
Eupl12g00077 517 Pfam Protein of unknown function (DUF4005) 385 468 IPR025064 -
Eupl12g00077 517 MobiDBLite consensus disorder prediction 60 82 - -
Eupl12g00077 517 Gene3D - 131 184 - -
Eupl12g00077 517 MobiDBLite consensus disorder prediction 460 498 - -
Eupl12g00077 517 MobiDBLite consensus disorder prediction 330 344 - -
Eupl12g00077 517 PANTHER IQ-DOMAIN 5-RELATED 1 462 - -
Eupl12g00077 517 SMART iq_5 132 154 IPR000048 GO:0005515
Eupl12g00077 517 MobiDBLite consensus disorder prediction 329 404 - -
Eupl12g00077 517 MobiDBLite consensus disorder prediction 18 112 - -
Eupl12g00077 517 MobiDBLite consensus disorder prediction 430 498 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl12g00077 Eupl-Chr12 2674312 2681735 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl12g00077 1 516 IQD Protein Family AT3G59690 45.567 8.70e-131 388
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl12g00077 - - nnu:104586996 580.867