Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl12g00039 ATGGAGTCTCTTACTGTGTATCTGAGCCTTTCTTCTCCCCCTCCAATCCAAAACCATCATAAAACTCGCAAAACCACTTGTCTTCTTTCAAATGCCCACCAAAACCGCCTTACTGCCTCTAAACCTGCCTCCCAGGCGTTTAATTACCACCAAGCCACCCATCTCTTCCGAAATTCCTCAAAGATCGCTGAAACCACACTATCCGTTACTCGTTCTCCCCCAAACCAGACTACAACCGTGCAAACTGTTTCAAAGTTTTTCCAAAACCACTTTTCGGTCCGAAAAACTGCTTCTTTTGTGAAAATCGCGACTACCCACATCCCATTTCCCTTAAAAAACCACAATTCGATTCACAAAACAGCTTCTTTCCTCAAAATTACGCCTACCCATCTGTCAAATCCTCTCCAAAGACACCTTTTGATCCTCAAAACGGCTTCTTTTCTGCGAGATTCTCTAAAACTCCAACTCTCTATTGCGTTAATGGTGGTGGTCTCTGCTCCATTTCCCTGCTTTGCCACTGAAACTATTATTACTAATGACGAAGTCTCAGATAAAATCAACCTCGAATCAATTCTAATTTCAATCGACGACTTCTTCAACCGGAATCCTTTTTTTGTTGCTGGGGTTACCTTCATTTGGCTCGTTGTGATCCCTCTAACCCAGGAATATCTGAAGAAATACAAGCTTATTTCTGCCATTGATGCCTTCCGAAAGCTCCGAGACGACTCGAATTCGCAGCTCTTGGATATTAGGGACAAGCAGAGTCTGCTGTATTTGGGTTCTCCCAATTTGAAGGTTTTGAATAAGAGTGTGGTCCAAGTTCAATTCACAGAAGGAGAAGAAGAGGTTTTTGTGAAGAAGGTTTTGGAGAACTTCAGGGATCCTGCAAACACCACTGTCTGTGTTCTTGACAACTTTGATGGTAATTCCATGAAAGTGGCTGAGTTATTGTTCAAGAACGGCTTCAAAGAGGCTTATGCGATCGAAGGTGGGCTCAGAGGCAAGGATGGGTGGCAGGCAATACAGGAAACCCTTCTGCCCCCATCCGTGCATGTTTACCCAAAGAAGAAGGGTAAACTGTCAAAACGGCTTGAAACGAATGGAGAAGGAATAAACAGGCAGACTGAAGACAATAGCCAGAGTCAGAGTCAGACTCCCTCTTCTACAACTGTCCAAGCAAATGGAAGCGAAGAGGTGGAAAATGGATATAGTAATTCCAAGGGACCCACTCCGCAAGCAAATCTTTGTTCAAAAAGACCGTCGTCACCATACCCAAATGAGCTGAGCAAGATTGGATGGCTACATGCCATCAAAAGAAACAGTGTAAAGAGGGGGTGA 1338 0.441 MESLTVYLSLSSPPPIQNHHKTRKTTCLLSNAHQNRLTASKPASQAFNYHQATHLFRNSSKIAETTLSVTRSPPNQTTTVQTVSKFFQNHFSVRKTASFVKIATTHIPFPLKNHNSIHKTASFLKITPTHLSNPLQRHLLILKTASFLRDSLKLQLSIALMVVVSAPFPCFATETIITNDEVSDKINLESILISIDDFFNRNPFFVAGVTFIWLVVIPLTQEYLKKYKLISAIDAFRKLRDDSNSQLLDIRDKQSLLYLGSPNLKVLNKSVVQVQFTEGEEEVFVKKVLENFRDPANTTVCVLDNFDGNSMKVAELLFKNGFKEAYAIEGGLRGKDGWQAIQETLLPPSVHVYPKKKGKLSKRLETNGEGINRQTEDNSQSQSQTPSSTTVQANGSEEVENGYSNSKGPTPQANLCSKRPSSPYPNELSKIGWLHAIKRNSVKRG* 446
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl12g00039 445 MobiDBLite consensus disorder prediction 370 430 - -
Eupl12g00039 445 Gene3D - 226 351 IPR036873 -
Eupl12g00039 445 ProSiteProfiles Rhodanese domain profile. 285 347 IPR001763 -
Eupl12g00039 445 MobiDBLite consensus disorder prediction 371 424 - -
Eupl12g00039 445 PANTHER RHODANESE-LIKE DOMAIN-CONTAINING PROTEIN 4, CHLOROPLASTIC 103 349 IPR044240 -
Eupl12g00039 445 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 210 338 IPR036873 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl12g00039 Eupl-Chr12 1095959 1107789 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl12g00039 183 338 Sulfurtransferasese or Rhodanese AT4G01050 40.881 3.52e-28 114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl12g00039 - - ming:122093252 410.223