Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Eupl12g00024 | ATGGCGTCGGCGTCCAATTCTCCTTGTGCAGCTTGCAAGTTTCTCCGGCGCAAATGCCAGACAGAATGTGTGTTCGCTCCCTACTTCCCACCAGATCAGCCCCAGAAGTTTGCCAATGTTCACAAGGTGTTTGGTGCAAGCAATGTCACGAAGCTTCTCAATGAGCTTCACCCACACCAGCGTGAGGATGCCGTTAATTCCCTTGCTTACGAGGCCGACATGCGCCTCCGTGACCCCGTTTACGGTTGCGTCGGCGTCATCTCCCTTCTCCAGCGCCAACTCCGTCAACTCCAAATGGATCTTAGTTGTGCCAAGTCTGAACTCTCTAAGTACCAGAATCTTGGCATCACAGGTCATGGCCTTATCGCCGCTGCCGCTGCTGCTGCCGCCACCCACAATCACCCACATATGGGAATGAGCCTCGTAACCGGCCGCGACCACCACCAATTTTTCTCTAGGGATCAACAGCAGGTTCTTAGGAGTTTCGATACTAACACTCCCTACGATGCCACCCTTGTCACCATGAATGTATCCACAAGCATTGGGCAGTTGGGTCAGTTCCAGCAACCCCGAGCCGCCGGAGTCGACCATTGCCGTAGCATCGGGCCCTCTTTGGATTACTCACTCCATGGATCACATACCTAA | 645 | 0.5395 | MASASNSPCAACKFLRRKCQTECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELHPHQREDAVNSLAYEADMRLRDPVYGCVGVISLLQRQLRQLQMDLSCAKSELSKYQNLGITGHGLIAAAAAAAATHNHPHMGMSLVTGRDHHQFFSRDQQQVLRSFDTNTPYDATLVTMNVSTSIGQLGQFQQPRAAGVDHCRSIGPSLDYSLHGSHT* | 215 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Eupl12g00024 | 214 | ProSiteProfiles | LOB domain profile. | 7 | 108 | IPR004883 | - | |
Eupl12g00024 | 214 | PANTHER | LOB DOMAIN-CONTAINING PROTEIN 4-RELATED | 5 | 149 | - | - | |
Eupl12g00024 | 214 | Coils | Coil | 87 | 114 | - | - | |
Eupl12g00024 | 214 | Pfam | Lateral organ boundaries (LOB) domain | 8 | 105 | IPR004883 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Eupl12g00024 | Eupl-Chr12 | 769496 | 772990 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Eupl12g00024 | 2 | 204 | AS2 family | AT1G65620 | 65.278 | 1.88e-79 | 234 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | LOB | Eupl12g00024 | LOB | 7e-43 | No_clan |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Eupl12g00024 | - | - | nnu:104593356 | 344.739 |