Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl11g01729 ATGGGAAATAATGACAAGGTTGCAATGAAGCAAGACCATGAAACGAAGAGGAAGACTCCTCTCCAACTTGAAGCCCTCGAGAATTTCTATTCAGAGGAGAACTATCCCACACAAAAGGCGATGGAGGACTACGCTTCAGTTCTCAAGTTAACATATAAACAGGTCCGTGGATGGTTTGTTGAGAGGAGGAGGAAGGAGAAAAGGGAGAAGACGGTGTGGACATCGAGTAAGAAAGGTATAAAGGGCAGTTGTAGAAGCGGTTGTAATACAGTGAGAGGTCCTGCAGACAAGATACTCAAGAAAGATTCTTTGAGTCAGAGAATGAAAACCCTCTCGTCTTCGAAATGCAATCAATTGCAGCTTCTAGAATTGGATCAGTTCAAGAGGAATCACAGTAATAAGCCAAAGCGAAAACTTTCCCATCTACAAGATATGCTGCCTCCAGACTACATTCTGAAGAAGATATTCCGAAAAGATGGTCCTCCTCTTGGCGTAGAGTTTGATTCTCTTCCTATCGGAGCGTTTCACTACTCTGCAGGTTCAAAAAAGTCTCGCCCCACTTGCGCGGTCAGCCAAGGAGCACCCAAAAGGAGAAAGGTCTCCAAGTCCTCCATCTTTAACTCCCAGGCATGCACACAAAGGAGTGGTCCAGTGAAGACGCATGGTATTGGCAAAGGTCTGATGACAGTGTGGCGTGCAACGAACCCCAATGCTGGAAGTTTTCCTACTGGTGTCAATTTTACTGGCAGAGAAGCCGCCATACGTACCAATTCTACCATTTCTAAATCCCAACCACTACGTCCAGAAATGAAAAAATCGCGACATCAAAGACTGGCTGTGAAACAGAGGAGGTTGGGGAATAAATTACAGGATAGAAGGAAGCGTGCCATTAAAAAAATAAGGGTGGAAAGTAAGAAGGATGAAAATCCGAAGAAGCCACACCAAGCAGAATGCAAACTTGCACTTGAAGGACTGCGGTCTCAAGAGTTCTCAAATGCATTAGCATTATTGGTGGATGACGAGGAGCTGGAGCTAAGAGAGTTACAAGCAGGACCAAATCCACTGACATGCTCTGCTCATCTAGCTTCAAATGGGCTGCATGGTTGTTCACTTTGTAAAGACTTACTGGCGAGGTTCCCTCCCCATTCTGTGAAGATGAAGCAACCATTCCGGATGCAACCTTGGGTATCTTCGACAGAGCTTGTCAAGAAACTTTTTAAGGTCTTCCGTTTCTTGTATAGTCATGCCGTAGCAGTTGACATGTGCGCTTTCACTCTGGATGAGTTTGCTCAGGCATTTCATGACAAGGACTCCTTGTTACTTGGAAAAATACATGTGGTGCTTCTCAAACTTCTTCTGTCAGATGTTGAAATGGAGCTTAGTAGTGGATTTCTTTCCCATGCAAGCAAAGACTGCAGGTTCCTTGGGTTTCTTCACTCAGTTGAACGCCAAGGATTTGTTGTGAAGTTTTGGAATAGATCTCTGAACCCTCTTACATGGACAGAAATACTGCGTCAAGTTTTGGTTGCAGCTGGTTTTGGTTCAAAACAGAGTACATTGCGAAGGGAACCCCTAAAGAAGGAAGGGAGTCGTATGGCAAACTATGGCTTATGTCCTGGTACTTTGAAGGGTGAACTGTTCAGTATTCTTTCTGAGCAAGGAAATAATGGGTTGAAAGTCTCTGAGCTGGCAAAAAAAATTCAGGTGGTCGAGTTAAATCTCACCAACACAACTGATGAATTGGAACTTCTGATATGTTCAACCCTTTCAAGTGACATCACTTTATTTGAAAAGATCTCACCTTCTGCATACCGTCTACGCATTAATCCTCTAATTACAAAGGGAGCAGGAGATTTTCTATCTGATACTGAAGACTCTGGAAGTGTTGATGATGATTCTGGGGACAGCATCACTAACAGCAGTAGTGATGATTCTGAGTTGGATTCGGCAAACACTCTCAGTATAGTTAAATATAAGGGCCATCGTAAAAGGAATAATAACATGTTGACTGAATACACTGAAATTGATGAGAGTCATTCAGGAGAAGTTTGGGTTTTAGGATTGATGGAAGGTGAATATTCAGATCTAAGCATTGAAGAGAAGCTGAATGCTTTGGTGGCTTTGGTTGATCTTACGAGTGCTGGATCCTCTCTAAGAATGGAGATTTTGGAAGAGCTGCTTGAATTGTATTTGCCTATTTGGAAATCTGCTTTCTCGATTTGTTGA 2226 0.4313 MGNNDKVAMKQDHETKRKTPLQLEALENFYSEENYPTQKAMEDYASVLKLTYKQVRGWFVERRRKEKREKTVWTSSKKGIKGSCRSGCNTVRGPADKILKKDSLSQRMKTLSSSKCNQLQLLELDQFKRNHSNKPKRKLSHLQDMLPPDYILKKIFRKDGPPLGVEFDSLPIGAFHYSAGSKKSRPTCAVSQGAPKRRKVSKSSIFNSQACTQRSGPVKTHGIGKGLMTVWRATNPNAGSFPTGVNFTGREAAIRTNSTISKSQPLRPEMKKSRHQRLAVKQRRLGNKLQDRRKRAIKKIRVESKKDENPKKPHQAECKLALEGLRSQEFSNALALLVDDEELELRELQAGPNPLTCSAHLASNGLHGCSLCKDLLARFPPHSVKMKQPFRMQPWVSSTELVKKLFKVFRFLYSHAVAVDMCAFTLDEFAQAFHDKDSLLLGKIHVVLLKLLLSDVEMELSSGFLSHASKDCRFLGFLHSVERQGFVVKFWNRSLNPLTWTEILRQVLVAAGFGSKQSTLRREPLKKEGSRMANYGLCPGTLKGELFSILSEQGNNGLKVSELAKKIQVVELNLTNTTDELELLICSTLSSDITLFEKISPSAYRLRINPLITKGAGDFLSDTEDSGSVDDDSGDSITNSSSDDSELDSANTLSIVKYKGHRKRNNNMLTEYTEIDESHSGEVWVLGLMEGEYSDLSIEEKLNALVALVDLTSAGSSLRMEILEELLELYLPIWKSAFSIC* 742
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl11g01729 741 MobiDBLite consensus disorder prediction 184 204 - -
Eupl11g01729 741 MobiDBLite consensus disorder prediction 632 648 - -
Eupl11g01729 741 Gene3D - 3 82 - -
Eupl11g01729 741 MobiDBLite consensus disorder prediction 622 648 - -
Eupl11g01729 741 SUPERFAMILY Homeodomain-like 14 74 IPR009057 -
Eupl11g01729 741 SMART HOX_1 11 73 IPR001356 GO:0003677
Eupl11g01729 741 Pfam Homeodomain 18 68 IPR001356 GO:0003677
Eupl11g01729 741 Pfam WSTF, HB1, Itc1p, MBD9 motif 1 679 722 IPR028942 -
Eupl11g01729 741 CDD homeodomain 17 63 IPR001356 GO:0003677
Eupl11g01729 741 PANTHER HOMEOBOX-DDT DOMAIN PROTEIN RLT2 531 614 IPR044977 GO:0006357
Eupl11g01729 741 SMART testlast3 399 458 IPR018501 -
Eupl11g01729 741 ProSiteProfiles 'Homeobox' domain profile. 9 69 IPR001356 GO:0003677
Eupl11g01729 741 Pfam DDT domain 400 455 IPR018501 -
Eupl11g01729 741 Pfam HB1, ASXL, restriction endonuclease HTH domain 540 607 IPR007759 GO:0006355
Eupl11g01729 741 ProSiteProfiles DDT domain profile. 399 458 IPR018501 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl11g01729 289 728 Homeobox Transcription Factor Family AT1G28420 32.007 1.84e-62 226
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-other Eupl11g01729 DDT 7.4e-06 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl11g01729 - - nnu:104610117 879.396