Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl11g01689 ATGATTCTCAGTGAAGAATGTAAAAAAGATGTACCAGTGGTTCTAATTGATATGCACAATTGCAGCCTTGATTCTAAGATAAAGATGAATTTGGGTATGCTTTGTCACCTTTTTCTTTATTATCTTAATCTACTTTTAATGGCGTTTTCATTGGTGGGTGAGATTTGTAAATGTGATTTGTTTCTTGTTCTCTTTTCAGAGGCTCTGGTTGTTGAAAAGGTTGAAGAAGCTAAAAAACCAGCAGTAAGGAAGAAAGTGGTGTCATCAGAACAAAAATCAAAGAAGAGTAGTAAAAAAGAGAAGAAAGTGAAGGATCCCAATATGCCTAAGCGTCCTCCAACAGCTTTCTTCCTCTTCATGGATGATTTTAGAAAATTGTACAAGGAAGCAAATCCAGACTCAAAGAGTGTTGCAGTGGTTGCAAAGGAAGGTGGTGAGAAATGGAAATCTATGACAGAAGAAGAGAAGAAATCTTATATGGATAGAGTTGTGGAACGGAAGGCAGAGTATGAGAAGGCAATGGAGAAATTCAATGCAGAAAATGGAGAAGAGCAAGCATCTTCAGATAAAGATGAAGAGTAA 582 0.366 MILSEECKKDVPVVLIDMHNCSLDSKIKMNLGMLCHLFLYYLNLLLMAFSLVGEICKCDLFLVLFSEALVVEKVEEAKKPAVRKKVVSSEQKSKKSSKKEKKVKDPNMPKRPPTAFFLFMDDFRKLYKEANPDSKSVAVVAKEGGEKWKSMTEEEKKSYMDRVVERKAEYEKAMEKFNAENGEEQASSDKDEE* 194
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl11g01689 193 PANTHER HIGH MOBILITY GROUP B PROTEIN 12-RELATED 5 191 - -
Eupl11g01689 193 MobiDBLite consensus disorder prediction 174 193 - -
Eupl11g01689 193 MobiDBLite consensus disorder prediction 85 110 - -
Eupl11g01689 193 ProSiteProfiles HMG boxes A and B DNA-binding domains profile. 109 178 IPR009071 -
Eupl11g01689 193 CDD HMG-box_AtHMGB1-like 110 170 - -
Eupl11g01689 193 Coils Coil 160 187 - -
Eupl11g01689 193 MobiDBLite consensus disorder prediction 85 108 - -
Eupl11g01689 193 Gene3D High mobility group box domain 91 192 IPR036910 -
Eupl11g01689 193 Pfam HMG (high mobility group) box 109 178 IPR009071 -
Eupl11g01689 193 SUPERFAMILY HMG-box 100 183 IPR036910 -
Eupl11g01689 193 SMART hmgende2 108 179 IPR009071 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl11g01689 Eupl-Chr11 34749822 34751788 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR HMG Eupl11g01689 HMG_box 1.2e-18 CL0114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl11g01689 K25507 - msin:131236809 186.037