Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl11g01672 ATGCAGAGTGGTGCCGCAGACAATGAAGCTAGGGTTAATAATTCTCCCTCTTTGTCACCTCCGCCTAATCCACCTTCTTCTTCTGCTTCTGCTATTTCGGTTTTTAATTCTTCGATTCCGCCGGTCTCGGAGTTTGATGTTGATGATGATCATCATGTGGAAGAGAAGTCGACGATCAATGGAGTTGGAGAACAGGTGATTAGTGAGCAGATCGATAGAGGAAAGCTCGCGAAATCGGTACCGAGCTTGATTTCTGTTACAGCGGCAACGGCTGAGGCATCTTCGATGAACTTCGCGCAGAGTTATAGGGTCGAAAGAGCAGGGGAGATGATTAAAGTTGAGCAGGCGCGGAGAGTCAATGAGAGTGTCGCAGTTCCATCAGTGGCAGCAGTGCCGGTGTTACAGTCGCAACCAATTTTCCACACTAGCTTTGTGCCTGTTCCATCGGTGATCCAGAATCCTTTCTTTCCTACAGTGGTAAGGGGTCCACCCGTGAATTACTCCCTGTGTCCTCCCCTCAATCGTGAAGCAACTAAAAATCAGGAAATGAATGTGTTCGCAAGTTCTCAGGGTCCACAGAATGGTAATACTTTAAGTGGTAATGCCTCAGTTCCTACACACAAACGGAGGGTGGTTAGTCCAAGATGCTTGAGCAGAATGAGTTTGACTACAGTTTCAGATGGAAACAGGAAGGCCATTCCAGAACCTCTGGCTAAACATGGGTTCCCCCCCTCACAGGATCATAATGCATTGGAAGTTGCTCCAAATGTAAGGCCATCTTTGGTTTCCATTGTCTCAGAGCCTCAGTCTGGATATCTTCCTTCAGCAAGTTTGTATAAACCTGAGGACGACAAGGAGATCAAAGGGAAGGGTTGGGTTGTACTTGTGCAGAAAGAGTTGCGGAACACTGATGTTGGCAACCTGGGAAGAATTGTGCTTCCAAAAAAGGATGCAGAGGCAAATCTTCCTCCCTTAGTTGCAAAAGACGGACTTATTTTACAAATGGAGGACATGACTCATTCAGTTAAATGGAAATTTAAGTACAGGTATTGGCCAAACAACAACAGTAGATGTATGTTATGGAGAATACAGGAGATTTTGTAA 1104 0.4574 MQSGAADNEARVNNSPSLSPPPNPPSSSASAISVFNSSIPPVSEFDVDDDHHVEEKSTINGVGEQVISEQIDRGKLAKSVPSLISVTAATAEASSMNFAQSYRVERAGEMIKVEQARRVNESVAVPSVAAVPVLQSQPIFHTSFVPVPSVIQNPFFPTVVRGPPVNYSLCPPLNREATKNQEMNVFASSQGPQNGNTLSGNASVPTHKRRVVSPRCLSRMSLTTVSDGNRKAIPEPLAKHGFPPSQDHNALEVAPNVRPSLVSIVSEPQSGYLPSASLYKPEDDKEIKGKGWVVLVQKELRNTDVGNLGRIVLPKKDAEANLPPLVAKDGLILQMEDMTHSVKWKFKYRYWPNNNSRCMLWRIQEIL* 368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl11g01672 367 Gene3D - 288 364 IPR015300 -
Eupl11g01672 367 MobiDBLite consensus disorder prediction 1 33 - -
Eupl11g01672 367 SUPERFAMILY DNA-binding pseudobarrel domain 296 360 IPR015300 -
Eupl11g01672 367 MobiDBLite consensus disorder prediction 1 16 - -
Eupl11g01672 367 PANTHER B3 DOMAIN-CONTAINING TRANSCRIPTION FACTOR ABI3 219 358 IPR044800 GO:0003700
Eupl11g01672 367 MobiDBLite consensus disorder prediction 188 210 - -
Eupl11g01672 367 CDD B3_DNA 297 362 IPR003340 GO:0003677
Eupl11g01672 367 MobiDBLite consensus disorder prediction 188 206 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl11g01672 Eupl-Chr11 34105236 34193745 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl11g01672 283 357 B3 DNA Binding Superfamily AT1G28300 54.667 4.88e-21 91.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl11g01672 K09287 - psom:113295969 233.032