Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl11g01637 ATGGTGAGGAAGAGGAGAACTGAACTTCCTAGTGGCGGTGAAAGTTCAGAATCTAAAGAAACCAGTGGTAGCGGTGGCAGTGGTGCCCAGCGTCCAACAGAAAGGGTTCCACCACCAGCTCAACAGGGAGTTGGAGGAGGTGGTGGATATCAAGGAGGAAGGGGGTGGGCCCCCCAATCTCAGCAAGGAGGCCGTGGAGGATATGGTGGTGTAGGGGAATATCCTCAGGGACGTGGCACATCTCAGCCTCGTGCTGGGATGGCACCTCAGGAACATGGTGGCCCTCCGTCTGAATATCAGGGTCGGGGAAGTCAGCCACAAATGCCCCCTTTGCAACCTGGTGGTACCATGATTGAATCTGGTGGGAGGCGCCGAGGTGGTGTGGCTAGTGGTCGTGGTGGAGGCCCTTCCTCTGCTGGTCCTTCTAAGCCACCGGTTCCCGAGCTGCACCAAGCAACCCAGGCTACATATCAAGCCGCGGTGACCCCTGCAGAATCCTCCTCTCAAGCAGGTTCTTCATCTCGGTCACCTGAGCCAGGTCCTTCAGCAGTGACACAGCAGTTTCAGCAGCTTTCAGTCGATTCGGTAGGGGCTTCCAGCCAGATACACCAGCCTTTGGCTCCATCGAGCAAATCTATGAGGTTTCCTCTCCGTCCTGGCAAGGGTTGCATTGGTGTTAGGTGTGTGGTCAAGGCAAACCATTTCTTTGCTGAGCTACCAGATAAAGATCTTCACCAATACGATGTTTCTATTACGCCTGAAGTTACATCACGGGGTGTTACACCTGCTGAAGTTACATCACGGGGTGTGAATCGGGCTGTTATGGAGCAGCTGGTGAAATTGCATAGAGAGTCGCACCTTGGAAAGCGACTTCCTGCTTATGATGGCCGTAAGAGTCTTTATACTGCTGGACCACTTCCTTTTACTTCAAAAGAGTTCTCAATTACTCTGGTCGATGAGGATGATGGCACGGGTGGTCCCAGGAGAGAAAGGCAATTCAGAGTTGTCATCAAATTGGCTGCTCGTGCTGATTTACACCATTTAGGATTGTTTTTACAGGGGAAGCAGGCAGATGCACCTCAAGAAGCTCTTCAGGTTCTCGACATTGTTCTGCGTGAACTGCCTACTGCTAGGTACTCCCCTGTGGGTCGGTCATTTTATTCCCCTGATTTAGGGAGACGACAGACGCTTGGTGACGGGTTGGAAAGTTGGCGTGGTTTCTATCAAAGTATTCGTCCAACTCAGATGGGTCTGTCACTGAATATTGATATGTCGTCCACCGCTTTCATTGAGCCCTTGCCGGTCATTGATTTTGTAACCCAGCTCTTGAACCGCGATGTCTTAGCTAGACCATTGTCTGATGCTGATCGCGTGAAGATTAAGAAGGCTCTTAGAGGTGTGAAGGTTGAAGTTACACACCGGGGAAATATGCGTAGAAAATACCGTATTTCTGGCTTAACATCACAGTCAACACGAGAGCTTACTTTCTCAGTCGACGAAAGAGGTACAATGAAATCTGTTGTTCAATATTTCCATGAGACTTATGGTTTTGTCATTCAACATACGACATGGCCTTGTCTACAAGTGGGGAATCAGCAGAGGCCGAATTATCTGCCTATGGAGGTATGCAAAATTGTGGAAGGCCAGAGGTACTCCAAGAGGTTGAATGAGAAACAGATTACTGCTCTGCTGAGAGTGACCTGTCAGCGTCCTCATGAACGAGAGCTTGATATTATGCAGACGGTTCATCACAATGCTTACCATGAAGACCCTTACGCAAAGGAATTTGGCATTAAAATCAGTGAGAAACTTGCCTCAGTTGAAGCACGCATTCTGCCTGCACCTTGGCTTAAATACCATGATGAGGGAAGAGAGAAGGATTGCTTGCCACAAGTCGGTCAATGGAACATGATGAATAAGAAAATGGTTAATGGGGGAAGAGTCAACAACTGGATGTGCATAAACTTTTCACGCAATGTGCAAGATAGTGTGGCCCGTCAGTTTTGTCATGAGCTTGCGCAAATGTGCCAGATTTCTGGCATGGCATTTAGTCTGGAACCGATACTTCCAGCGTGCAGTGCTCGTCCCGATCATGTTGAGAGAGCCTTAAAGACTCGTTACCATGATGCCATGACCATACTCAAGCCCCAGGGCAAGGAACTAGACCTGCTGATTGTTATTTTGCCAGATAATAATGGTTCTCTATATGGTGATTTGAAGCGGATCTGTGAGACGGATCTTGGACTTGTTTCTCAGTGTTGTTTAACGAGGCATGCTGTTAAGAGGAGTAAACAATATCTGGCAAATGTAGCTCTTAAGATAAATGTGAAAGTCGGAGGAAGGAACACAGTGCTCATTGATGCATTGTCAAGACGCATACCTCTGGTCAGTGACCGACCAACCATCATCTTTGGTGCTGATGTAACCCATCCCCATCCTGGGGAGGACTCGAGCCCCTCTATTGCAGCTGTTGTGGCTTCTCAAGATTGGCCAGAGGTCACTAAGTATGCTGGTTTGGTCTGTGCTCAAGCCCACCGCCAGGAACTCATCCAAGATCTGTTTAAAGTCTGGCAAGATCCTGTAAGAGGAACTGTTAGTGGAGGCATGATCAAGGAGCTTCTGATGTCTTTCCGTAGAGCAACTGGGCAGAAACCTCTTCGGATCATATTCTACAGGGATGGTGTTAGTGAAGGCCAATTTTATCAGGTCTTATTGTATGAACTGGATGCAATTCGTAAGGCATGTGCCTCTCTGGAACCAAATTATCAGCCTACTGTAACATTCGTCGTGGTTCAAAAGCGTCATCACACAAGGTTGTTTGCAAGTAACCATGCTGATCGCCGTGCAGTTGATAAGAGTGGAAACATCTTACCTGGGACAGTTGTGGACTCCAAGATCTGCCATCCGACAGAATTTGACTTCTACCTGTGCAGCCATGCTGGTATCCAGGGTACAAGCCGGCCGGCTCATTACCATGTACTGTGGGATGAGAACAACTTTACAGCTGATGGGCTTCAGTCTCTTACCAATAACCTCTGCTACACATATGCGAGGTGCACCCGTTCTGTGTCCATTGTGCCCCCGGCTTATTATGCACATCTGGCTGCCTTCCGTGCGCGTTTTTACATGGAGCCGGAGACTTCGGATAGTGGATCATTAATAAGTGGTGCAGCAGGTCGTGGTGCGGGTGTGGGGAGTGGTGGTGCCCGCAGCACACGGATGCCAGGTGCAAATGCTGCAGTGCGACCTCTCCCCGCACTGAAGGAGAACGTGAAAAGGGTTATGTTCTATTGCTAA 3297 0.4904 MVRKRRTELPSGGESSESKETSGSGGSGAQRPTERVPPPAQQGVGGGGGYQGGRGWAPQSQQGGRGGYGGVGEYPQGRGTSQPRAGMAPQEHGGPPSEYQGRGSQPQMPPLQPGGTMIESGGRRRGGVASGRGGGPSSAGPSKPPVPELHQATQATYQAAVTPAESSSQAGSSSRSPEPGPSAVTQQFQQLSVDSVGASSQIHQPLAPSSKSMRFPLRPGKGCIGVRCVVKANHFFAELPDKDLHQYDVSITPEVTSRGVTPAEVTSRGVNRAVMEQLVKLHRESHLGKRLPAYDGRKSLYTAGPLPFTSKEFSITLVDEDDGTGGPRRERQFRVVIKLAARADLHHLGLFLQGKQADAPQEALQVLDIVLRELPTARYSPVGRSFYSPDLGRRQTLGDGLESWRGFYQSIRPTQMGLSLNIDMSSTAFIEPLPVIDFVTQLLNRDVLARPLSDADRVKIKKALRGVKVEVTHRGNMRRKYRISGLTSQSTRELTFSVDERGTMKSVVQYFHETYGFVIQHTTWPCLQVGNQQRPNYLPMEVCKIVEGQRYSKRLNEKQITALLRVTCQRPHERELDIMQTVHHNAYHEDPYAKEFGIKISEKLASVEARILPAPWLKYHDEGREKDCLPQVGQWNMMNKKMVNGGRVNNWMCINFSRNVQDSVARQFCHELAQMCQISGMAFSLEPILPACSARPDHVERALKTRYHDAMTILKPQGKELDLLIVILPDNNGSLYGDLKRICETDLGLVSQCCLTRHAVKRSKQYLANVALKINVKVGGRNTVLIDALSRRIPLVSDRPTIIFGADVTHPHPGEDSSPSIAAVVASQDWPEVTKYAGLVCAQAHRQELIQDLFKVWQDPVRGTVSGGMIKELLMSFRRATGQKPLRIIFYRDGVSEGQFYQVLLYELDAIRKACASLEPNYQPTVTFVVVQKRHHTRLFASNHADRRAVDKSGNILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENNFTADGLQSLTNNLCYTYARCTRSVSIVPPAYYAHLAAFRARFYMEPETSDSGSLISGAAGRGAGVGSGGARSTRMPGANAAVRPLPALKENVKRVMFYC* 1099
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl11g01637 1098 FunFam Argonaute 10 611 786 - -
Eupl11g01637 1098 Pfam PAZ domain 456 563 IPR003100 GO:0005515
Eupl11g01637 1098 Pfam Piwi domain 724 1043 IPR003165 GO:0003676
Eupl11g01637 1098 Gene3D - 611 786 - -
Eupl11g01637 1098 SMART PAZ_2_a_3 437 569 IPR003100 GO:0005515
Eupl11g01637 1098 MobiDBLite consensus disorder prediction 149 208 - -
Eupl11g01637 1098 ProSiteProfiles PAZ domain profile. 433 547 IPR003100 GO:0005515
Eupl11g01637 1098 FunFam Protein argonaute-2 426 552 - -
Eupl11g01637 1098 Pfam Argonaute linker 2 domain 573 619 IPR032472 -
Eupl11g01637 1098 Gene3D - 792 1098 IPR036397 GO:0003676
Eupl11g01637 1098 Pfam Glycine-rich region of argonaut 94 206 IPR024357 -
Eupl11g01637 1098 Pfam Mid domain of argonaute 630 704 IPR032473 -
Eupl11g01637 1098 Pfam Argonaute linker 1 domain 381 431 IPR014811 -
Eupl11g01637 1098 SMART Piwi_a_2 723 1044 IPR003165 GO:0003676
Eupl11g01637 1098 ProSiteProfiles Piwi domain profile. 723 1044 IPR003165 GO:0003676
Eupl11g01637 1098 Pfam N-terminal domain of argonaute 227 371 IPR032474 -
Eupl11g01637 1098 CDD PAZ_argonaute_like 432 546 - -
Eupl11g01637 1098 MobiDBLite consensus disorder prediction 1 213 - -
Eupl11g01637 1098 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2C 204 1044 - -
Eupl11g01637 1098 SUPERFAMILY Ribonuclease H-like 718 1044 IPR012337 -
Eupl11g01637 1098 Gene3D paz domain 426 551 - -
Eupl11g01637 1098 FunFam protein argonaute 10-like 792 1098 - -
Eupl11g01637 1098 CDD Piwi_ago-like 591 1043 IPR045246 -
Eupl11g01637 1098 SUPERFAMILY PAZ domain 427 587 IPR036085 GO:0005515
Eupl11g01637 1098 SMART DUF1785_2 380 432 IPR014811 -
Eupl11g01637 1098 MobiDBLite consensus disorder prediction 14 29 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl11g01637 Eupl-Chr11 32869546 32884616 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl11g01637 146 1098 Eukaryotic Initiation Factors Gene Family AT1G48410 80.460 0.0 1589
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl11g01637 K11593 - nnu:104606963 1780.76