Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl11g01635 ATGGGGTCGAATTTGATTCCCGGTTATGATTGGATCAGCGACGTCGGAGCTTCTGACGCTGAATTCTGTTGGGCTCTCGACGGCTTCGACGATCATCCCAATGCCGCTACTGGTGTGGAGGTTGATGATGCCTACAAACAAGTTTGCTGTATCGAACAAACCGGCTCAAAAAAGAGAATGAGAGATGAATCATGCACAGGATTCACGTCTAAAGCTTCTCGTGAGAAAATGCGGAGAGATAAAATGAATTACAGGTTCTTGGAATTGGGTTCTATCCTTGACCCTGGGAGACCTCCTAAGTCTGATAAAGCTACTATTTTAAGTGATGCTGCTCGTTTGTTGGTACAGCTGAAAACTGAGGCAGAACAGCTCAAGGGAGCAAATGAAAAGCTTCAGGAGACAATTAAAGATCTTAAGGCAGAGAAAAATGAGCTCCGAGATGAGAAGATAAAGCTGAAGGTGGACAAGGAGAGGTTGGAAGAGCAGGTCAAAGCCTTGAGTGTACAGCCAGTTGGGTACATGCCACACCCAGCTGCATTCCATGCAGCTGCTATGGCTGCATTTGTGGAGCAGGGCCAATCTGCAGCAAACAAAACAGCAGCTCCCTTCCCTGGAGTTCCTGGAGTGGCTATGTGGCAGTGGATGCCTCCTGCTGTCGTGGACACTTCACAAGACCACAAGTTGCGGCCTCCCGTTGCCTAG 702 0.4858 MGSNLIPGYDWISDVGASDAEFCWALDGFDDHPNAATGVEVDDAYKQVCCIEQTGSKKRMRDESCTGFTSKASREKMRRDKMNYRFLELGSILDPGRPPKSDKATILSDAARLLVQLKTEAEQLKGANEKLQETIKDLKAEKNELRDEKIKLKVDKERLEEQVKALSVQPVGYMPHPAAFHAAAMAAFVEQGQSAANKTAAPFPGVPGVAMWQWMPPAVVDTSQDHKLRPPVA* 234
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl11g01635 233 Gene3D - 69 150 IPR036638 GO:0046983
Eupl11g01635 233 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 66 117 IPR011598 GO:0046983
Eupl11g01635 233 CDD bHLH_AtILR3_like 71 146 - -
Eupl11g01635 233 PANTHER BHLH TRANSCRIPTION FACTOR 18 233 IPR044818 GO:0003700|GO:0006355|GO:0006879|GO:0046983
Eupl11g01635 233 Coils Coil 107 169 - -
Eupl11g01635 233 SMART finulus 72 123 IPR011598 GO:0046983
Eupl11g01635 233 Pfam Helix-loop-helix DNA-binding domain 70 117 IPR011598 GO:0046983
Eupl11g01635 233 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 71 139 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl11g01635 Eupl-Chr11 32676492 32682095 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl11g01635 10 233 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G54680 48.918 3.43e-65 200
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Eupl11g01635 HLH 2.5e-07 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl11g01635 - - msin:131236883 333.183