Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl11g01632 ATGATGTCTCCTACGGAGAACGATCCCTCAAATGGTTTTGTCCATGGAACCGAAACCTCTCAAAACAAACCCAAACAAAATCACTTCGAAAACCCAGATGGGAAAATCCGAATTTCTGAAAAGAGTACCGATTTTCTGCGAGAATCAGAGATGGATCGCGATGAGTTTCCCCTAAGACACTCGGAAATCAGGAATTTAGGCTCTCAAGAGTTGACTCTGAGCTATCTCTGCGATAATACTAAAATGGGTTTTCAAGAGAAAGAGTTTGCAGGGAAGAATTTATTGACCTCTTTAGAGAAAGGGAGGTATTGTAAGGGAAAGGAAGTGATTTCGGAGTCTCCAAACGAAGATGAGAGATGGGTAGAGAGGGACTTTTTGCAGTTGAATGGGAGTAGGGGAGGAGGAGGAGGAGGAGGAGGAGGAGGGTTGAAGAGAGAGATCGACGAAGAAGAAGAAATCAAAAGAGAGAAGAGGGAGAAGAAGCTGAAGCTAGAGACCCTTAATCTATCGCTCTCTCTCAACTCTTCGAACCCGTTGCCGAATGCCGATCCTCCTGTTATTCTGAAGCCGAGTAGGAGTATGCAGTCCTTGGCACCGTCGAACAACAATACCCGGACAGCGAGCTCCGATGACTTTACGGCTGCATCTCTCTCCTATTCGTACTCACACCCGTTCTCCCACAACCCCAGCTGCTCCCTCACACGGAACTCGACGGAGAATTATGAGTATTCGTGCGGTAGCCACCGTAGAGAGACTGACCAGATTTGGAATTGTGGGGAGGGGACTAATGGATCGGTTCATAGTCGGTTCAAACCAGTTGGCGACGGGGTTAATTTGTCGAACCATGGTGGTTTCAGTTATCCCTTAATGCAAGGAAATCGGCCGATCAATAAGGAATCGAGTAATGGTCTTTACAGAACAACCAGCTCTGAAAACTGTTCTTTCTTCCCGTCCGAACTGCCTGCCAAGCCATGGAAAGATTCTCAATCAATTGACTCGAGAGGAAGAGCTTCTGAGAAACAAAGGGGTTTTGAGAATTCAGATGGAGGGAGAGCGCATAAGCCAACGAGACCTGAGATGATTCTACGTGAAATTGTCTCTGAGTCTATTCCTGTCGTGGCTCAAATTTTTCAGGAGCTTCCTGAAGATGCAATTGAATCCACAAAGATGTATTTGAAGAGTCTCATTGGGGTGACTGAGAAGAGAGAGGAGTTAATCGGTCTCCAGGACCGACTCGGGAGAAGATCTGACCTCACATTTGAGATACTTTCGAAGTCGCACAAGGTCCAACTGGATATCTTGGTCGCGGTGAAGACGGGACTTGCAGACTACTTATCAGGGAAGAACCGTCTCCCCACGGCTGAGCTGGTGGAGATCTTCTTGCTGTCGAGGTGTCGGAATGTGAATTGCAAGAGTTTATTGCCTGCTGAAGACTGCGACTGCAAGATATGCTCAACGAAGAAGGGCTTCTGCAGCGCGTGCATGTGTCCTGTCTGTTTGAACTTTGACTGTGCCAACAACACTTGCAGCTGGGTTGGCTGTGATGTCTGTTCCCATTGGTGCCATGCTATCTGTGGCATCCAGAGGAATCTCATCAAGCCGGGCCCTAGCTTGAAGGAACCCATGGGGACCATGGAGATGCAATTCCATTGTCTTGGGTGTGGGCATGCTTCTGAGATGTTTGGGTTCGTTAAGGATGTGTTTATGTTCTGTGCAAAAGATTGGGGTCTAGAAACCCTGACAAAAGAGCTTGATTGTGTCAGGAAGATCTTCAGGGGCAGTTTGGACTCCAAGGGCAAGGAGCTGCAAAATAAGGCAGAGGAGATGTTCTCCAAGCTTGGAAATAAGATCATTTCTCCTTCGGATGCTTGTAACGCCATCCTTCAGTTTTTCAAGTATGGCGATTCAGGTTTTTCTGGTTCAGGTAGCTCTGCCAAAGACTTGACGGTGGCTCAAGTGAGTGAAAGGGGCACTGTGGACTCTCTTTCACCACCCACTTCTCTCCCTCCAAAATCTACCCCTTATAACATGAGCTCTCCTAGTATGAGGCGGGATATGTTGTCGCATAGAGACAATACTTATCAGATTGACCTTAAAGCCCTCATGAGTAATCAATCACAATCAGTGGAAGAGGAGTTGCGGTCCGGGATTTTGTCAAAGGACAGGTTCGACAACCTGGAAAGCATTGTGCGGATCAAGGAAGCAGAAGCGAGGATGTTCCAGAGCAGGGCAGATGATGCACAAAGGGAGGCAGAGGGGTATCGGCGGATGGCCTGTGCAAGGAGTGAGAAGTTGGAGGAAGAGTATTCTGGCAAGCTTGCAAAACTGTGTTTGCAGGAGACAGAGGAGAGGCGGAGGAAGAAGCTTGAGGAGCTCAAGGTATTGGAGAATTCCCAATATGATTACTACAAAATGAAGATGAGAATGCAAGCCGAGATTGCAGGCTTGTTGGAAAGGATGGAAGCAACAAAGCAGCAATGGGTGTAA 2487 0.4765 MMSPTENDPSNGFVHGTETSQNKPKQNHFENPDGKIRISEKSTDFLRESEMDRDEFPLRHSEIRNLGSQELTLSYLCDNTKMGFQEKEFAGKNLLTSLEKGRYCKGKEVISESPNEDERWVERDFLQLNGSRGGGGGGGGGGLKREIDEEEEIKREKREKKLKLETLNLSLSLNSSNPLPNADPPVILKPSRSMQSLAPSNNNTRTASSDDFTAASLSYSYSHPFSHNPSCSLTRNSTENYEYSCGSHRRETDQIWNCGEGTNGSVHSRFKPVGDGVNLSNHGGFSYPLMQGNRPINKESSNGLYRTTSSENCSFFPSELPAKPWKDSQSIDSRGRASEKQRGFENSDGGRAHKPTRPEMILREIVSESIPVVAQIFQELPEDAIESTKMYLKSLIGVTEKREELIGLQDRLGRRSDLTFEILSKSHKVQLDILVAVKTGLADYLSGKNRLPTAELVEIFLLSRCRNVNCKSLLPAEDCDCKICSTKKGFCSACMCPVCLNFDCANNTCSWVGCDVCSHWCHAICGIQRNLIKPGPSLKEPMGTMEMQFHCLGCGHASEMFGFVKDVFMFCAKDWGLETLTKELDCVRKIFRGSLDSKGKELQNKAEEMFSKLGNKIISPSDACNAILQFFKYGDSGFSGSGSSAKDLTVAQVSERGTVDSLSPPTSLPPKSTPYNMSSPSMRRDMLSHRDNTYQIDLKALMSNQSQSVEEELRSGILSKDRFDNLESIVRIKEAEARMFQSRADDAQREAEGYRRMACARSEKLEEEYSGKLAKLCLQETEERRRKKLEELKVLENSQYDYYKMKMRMQAEIAGLLERMEATKQQWV* 829
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl11g01632 828 MobiDBLite consensus disorder prediction 656 682 - -
Eupl11g01632 828 Pfam Coiled-coil region of Oberon 705 817 IPR032535 -
Eupl11g01632 828 MobiDBLite consensus disorder prediction 1 27 - -
Eupl11g01632 828 MobiDBLite consensus disorder prediction 173 209 - -
Eupl11g01632 828 PRINTS Arabidopsis thaliana 130.7kDa hypothetical protein signature 415 430 IPR004082 -
Eupl11g01632 828 PRINTS Arabidopsis thaliana 130.7kDa hypothetical protein signature 456 477 IPR004082 -
Eupl11g01632 828 PRINTS Arabidopsis thaliana 130.7kDa hypothetical protein signature 502 522 IPR004082 -
Eupl11g01632 828 PRINTS Arabidopsis thaliana 130.7kDa hypothetical protein signature 724 744 IPR004082 -
Eupl11g01632 828 PRINTS Arabidopsis thaliana 130.7kDa hypothetical protein signature 430 445 IPR004082 -
Eupl11g01632 828 PRINTS Arabidopsis thaliana 130.7kDa hypothetical protein signature 575 594 IPR004082 -
Eupl11g01632 828 PRINTS Arabidopsis thaliana 130.7kDa hypothetical protein signature 763 785 IPR004082 -
Eupl11g01632 828 PRINTS Arabidopsis thaliana 130.7kDa hypothetical protein signature 376 398 IPR004082 -
Eupl11g01632 828 MobiDBLite consensus disorder prediction 193 209 - -
Eupl11g01632 828 Coils Coil 143 170 - -
Eupl11g01632 828 MobiDBLite consensus disorder prediction 315 355 - -
Eupl11g01632 828 Pfam PHD - plant homeodomain finger protein 465 589 IPR032881 -
Eupl11g01632 828 MobiDBLite consensus disorder prediction 329 355 - -
Eupl11g01632 828 PANTHER VERNALIZATION-INSENSITIVE PROTEIN 3 73 827 IPR004082 -
Eupl11g01632 828 Coils Coil 806 826 - -
Eupl11g01632 828 CDD PHD_OBE1_like 495 554 IPR047578 -
Eupl11g01632 828 Coils Coil 730 750 - -
Eupl11g01632 828 MobiDBLite consensus disorder prediction 127 148 - -
Eupl11g01632 828 Coils Coil 778 798 - -
Eupl11g01632 828 MobiDBLite consensus disorder prediction 1 40 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl11g01632 Eupl-Chr11 32577165 32595183 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl11g01632 465 613 PHD Gene Family AT5G57380 24.161 1.61e-08 56.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl11g01632 - - ming:122079969 1045.42