Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl11g01628 ATGGATGACGATAGTGGATTGGGTATCCGTAATTGGGGTTATTATGAACCGGCACTTAAAGGAAACCTTGGTTTACAGCTCATGTCATCTGTGGCAGAGCGAGACATAAAACCTCTTCTCAGCGGACGTGATTCTGCTGTCATGGTTAGTGCCAATGGAGCTTTTCACCACAGGGATTGTGGGATCTCGGAATCTCCTGTCCCCATGGAGTTTGTGAGGGATGGTTGGATCAACCAGAGGGATAAGCTTCTGCATGTGCTACCGGGGAACCCTAATTTTTCAGTTCTATCTGAAACTTCTGGAACTCACGCCTTCCAGATGCTACAATCGCCTGATTTTTCAAAGGATGAAAGGGTGGTTCGAATGGAAGAGTCATGCAGTAAAAGAGATGGCCCTTTGAAGAAGAGACCAGGGGGCCGTGCCCAAAAATCCCCAAAAACGAAAAAGAGTAAAAAGGTTGTGCCACAGGATGAAACTAATTCTTCTGTTCAGCGAGCAAAGCCTGGGAAGAACACAGGAGTTGTCATAAATGGAGTTGATATGGATATTTCTGGTATTCCTATACCTGTGTGCTCGTGCACAGGAACTCCTCAGCAGTGTTACCGATGGGGCTGTGGTGGGTGGCAATCGGCATGCTGTACTACAAGTATTTCAATATATCCCTTGCCAATGAGCACTAAAAGGCGCGGGGCAAGGATTGCCGGACGGAAAATGAGTCAGGGTGCATTTAAGAAGGTCTTGGAGAAACTTGCGGCTGAAGGTTATAACCTTTCTAATCCTATTGATTTGAGGACTCACTGGGCGAAACATGGTACCAACAAATTTGTCACGATCAGGTAG 840 0.4655 MDDDSGLGIRNWGYYEPALKGNLGLQLMSSVAERDIKPLLSGRDSAVMVSANGAFHHRDCGISESPVPMEFVRDGWINQRDKLLHVLPGNPNFSVLSETSGTHAFQMLQSPDFSKDERVVRMEESCSKRDGPLKKRPGGRAQKSPKTKKSKKVVPQDETNSSVQRAKPGKNTGVVINGVDMDISGIPIPVCSCTGTPQQCYRWGCGGWQSACCTTSISIYPLPMSTKRRGARIAGRKMSQGAFKKVLEKLAAEGYNLSNPIDLRTHWAKHGTNKFVTIR* 280
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl11g01628 279 PANTHER - 1 279 IPR010409 -
Eupl11g01628 279 Pfam GAGA binding protein-like family 1 279 IPR010409 -
Eupl11g01628 279 SMART GAGA_bind_2 1 279 IPR010409 -
Eupl11g01628 279 MobiDBLite consensus disorder prediction 121 171 - -
Eupl11g01628 279 MobiDBLite consensus disorder prediction 121 137 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl11g01628 Eupl-Chr11 32347137 32349339 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl11g01628 1 279 BBR or BPC Transcription factor family AT2G01930 55.518 8.62e-104 302
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF BBR-BPC Eupl11g01628 GAGA_bind 3.1e-113 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl11g01628 - - tss:122645777 476.863