Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl11g01620 ATGGATTCCCAAAGGATCTACATCTACCGTTGTCAACGCACCGACGGGTTTCAATCCAATCCGATTGGGAATGGTGGGGACTCGAGTTACGGTTATGCTCCACCGGAGCATAGAGGAAATCCTGTCCGGAGAAGTTACGTTGCACGTCCTTTCAATCCGAATGAGGAAGGGGGCAGTGACGGCAGTCAGGATGCTAAGGTTTTGAATGTTCCACAGCTTGTTCAAGAAATTCAAGAGAAGCTCATGAAGGGAACTGTTGAATGTATGATCTGTTACGATATGGTCCGGAGGTCCGCCCCCATCTGGTCGTGTTCAAGCTGTTACTCCATTTTCCACCTGAACTGTATTAAGAAATGGGCTCGGGCGCCAACTTCTATTGATTTGTCTGCGGAGACGAATCGTGGATTGAATTGGCGGTGCCCTGGTTGCCAATCAGTACAACTCTTGATCTCTAAGGAGATTCGATACAGTTGCTTCTGTGGAAAGAGGCCAGATCCACCTTCTGATTTATATCTAACACCACATTCGTGCGGAGAGCCATGCGGGAAGCCACTTGAGAGAGAAGTGAGGGGCGGCTGCAATGGCAATGACGATCGCTGTCCCCATCTTTGTGTGTTGCAGTGTCACCCGGGTCCTTGTCCTCCTTGTAAGGCTTTCACACCTCCACGCCTGTGTCCTTGTGGGAAGAAAACGATCACGATGAGATGCTCTGATCGGAAGTCTGTGCTTACTTGTGGTCATCCCTGTGATAAGGTTCTTGAATGTGGGCGCCACCGATGCAAGCGGATTTGCCACACGGGGCCTTGTGAACCTTGTCAGGTTCTGATCGATGCCAAATGTTTTTGCAAGAAGAAAACGGAGGTCGTTCTTTGTGGAGAGATGGCTGTGAGAGGAGAAGTGAAAGAGAACGATGGCGTTTTTTCATGTAATTCGGTCTGTGGGAAGAACCTTGCTTGTGGACATCATTCCTGCAGTGATATTTGCCATCCAGGCCAATGTGGAGAGTGTGAACTAATTCCATGGAGGATTAAGACCTGCCATTGTGGGAAAACAAGATTACAGAAGGAAAGGCAGAGTTGCTTGGACCCAATTCCAACCTGCCCGCAGATATGCAGTAAGCCCCTCCCTTGTGGGGTTCACCATTGTAAGGAGGTTTGCCATGCTGGGGACTGTGCACCTTGTCTTGTAATTGTCAAGCAAAATTGCCGTTGCGGGTCTTCTTCCCGAACAGTTGAGTGCTACAGAACAATGGAAGAGAAGGATAAGTTCGTCTGTGAGAAGCCTTGTGGGCGGAAGAAAAACTGTGGGAGGCATAGGTGCAGCGAGAGGTGCTGCCCTCTCTCTAATTCCAACTATCAGTTATCAGATAATTGGGACCCACACTTGTGCTCAATGGTCTGCGGAAAGAAGCTCAGGTGCGGACAGCATTCTTGTGAGTCACTCTGTCACACTGGCCATTGTCCACCTTGCCTTGAAACCATATTCACTGATCTGACCTGTGCTTGTGAGAAGACTTCAATACCTCCTCCACTACCTTGCGGTACTACTCCTCCCTCATGTCAGCACCCATGCTCAGTTCCTCAGCCTTGTGGTCATTCCTCTTCACACTCTTGTCACTTTGGAGACTGCCCACCTTGTTCAGTTCCAGTGGCAAAGGAATGCATAGGCGGGCACGTTGTTCTCAGGAACATTCCTTGCGGATCAAGGGAAATTCGATGTAATCAACTATGTGGCAAGACCCGACAATGTGGTATGCATGCGTGTGCAAGAACTTGTCACCCACCGCCATGTGATTCTTCCTGTGGTTCTGGTTCTGTTTCGAAGACTTCTTGTGGGCAGGTATGCAGTGCTCCGAGGAGGGATTGCAGGCATACATGCACTGCTACTTGTCACCCTTCGGCACTTTGTCCTGATCAAAGATGCAATTTCCCAGTGACTATCACTTGTTCCTGTGGCCGGATAACTGCCACAGTCCCATGTGATGCGGGAGGCAACATTGGTGCATTTCACGTTGATACAGTCTTCGAAGCTTCTATTATTCAAAAGTTGCCAGTTCCACTTCAACCTGTTGAAGCAAATGGGAAGAAGGTCCCACTTGGGCAGAGGAAGCTCATTTGTGATGAGGAGTGTGGAAAGCTGGAGCGAAAACGGGTTCTTGCAGATGCCTTTGATATCACTCCCCCAAACTTGGATGCCCTTCATTTTGGCGAGAACTCCGCCGTTTCCGACTTGCTTGCAGAATTGTTTAGGCGAGAGCCGAAGTGGGTACTATCTATAGAGGAGAGATTCAAGTTCTTAGTGCTTGGCAAGAGTAAGGGAGGCACTGCAAATGGTCTCAGGGTTCATGTTTTCTGTCCAATGCAGAAGGAGAAGAGAGATGCTGTAAGGCAAATTGCAGAGAGATGGAAGCTCTCAGTTCATGCAGCTGGGTGGGAGCCAAAGCGGTTCCTAGTGGTTCATGTTACACCCAAGTCCAAAGTTCCGGCTCGACTGCTTGGCTCCAAAGGGGCTGTCCCCTTGAACGTGTCCCATCCACCGGCTTTTGATCCCTTGGTAGACATGGATCTAAGGCTCGTTGTGTCTCTACTGGATTTGCCAAGGGATGCAGATATAAGTGCTCTAGTCTTGAGGTTTGGTGGGGAGTGCGAACTAGTCTGGTTGAATGACAAAAATGCATTGGCCATATTTAGTGATCCTGCCAGGGCAGCAACTGCTCTGAGAAGGTTAGATCACGGGTCCGCTTATCATGGTGCTGTTGTGGTTACTCAGAGTGGTGGGGCATCAACAGCATCTTCTGGCATCAGTGCCTGGGGAGGAGCAGGTGTCACAAAAGAGGGAGGAACAGTTGCTGCACTGAAGGGTAATCCGTGGAAGAAGGCCATTGTGCAGGAAACCAATTGGAGGGAAGATTCATGGGGTGGTGAAGACTGGTCTAGTGGTGGTGCATCCGACATGCAGGTTCCTGCATGGAAAGGAAAGGAAGCTCCAATTCCTGCTTCAAGAAATCGGTGGAACGTTTTGGACCCAGATACAGTTTCAAAATCAGGTGGTGCATCCTCGGTTGGGGTTGAGAACCCAGGAAATCATCATATGGGAAGTTCTTCCACTGCAGAGCCAGAATTGAAAGCTTGTGGTTCAAATTTGACGGGACAGCCTCAAAGTAGCGTTGATGAAGCAGAGCTGTTAGAAGTAGTAGATGACTGGGAGAAAGCTTACGAGTGA 3222 0.4944 MDSQRIYIYRCQRTDGFQSNPIGNGGDSSYGYAPPEHRGNPVRRSYVARPFNPNEEGGSDGSQDAKVLNVPQLVQEIQEKLMKGTVECMICYDMVRRSAPIWSCSSCYSIFHLNCIKKWARAPTSIDLSAETNRGLNWRCPGCQSVQLLISKEIRYSCFCGKRPDPPSDLYLTPHSCGEPCGKPLEREVRGGCNGNDDRCPHLCVLQCHPGPCPPCKAFTPPRLCPCGKKTITMRCSDRKSVLTCGHPCDKVLECGRHRCKRICHTGPCEPCQVLIDAKCFCKKKTEVVLCGEMAVRGEVKENDGVFSCNSVCGKNLACGHHSCSDICHPGQCGECELIPWRIKTCHCGKTRLQKERQSCLDPIPTCPQICSKPLPCGVHHCKEVCHAGDCAPCLVIVKQNCRCGSSSRTVECYRTMEEKDKFVCEKPCGRKKNCGRHRCSERCCPLSNSNYQLSDNWDPHLCSMVCGKKLRCGQHSCESLCHTGHCPPCLETIFTDLTCACEKTSIPPPLPCGTTPPSCQHPCSVPQPCGHSSSHSCHFGDCPPCSVPVAKECIGGHVVLRNIPCGSREIRCNQLCGKTRQCGMHACARTCHPPPCDSSCGSGSVSKTSCGQVCSAPRRDCRHTCTATCHPSALCPDQRCNFPVTITCSCGRITATVPCDAGGNIGAFHVDTVFEASIIQKLPVPLQPVEANGKKVPLGQRKLICDEECGKLERKRVLADAFDITPPNLDALHFGENSAVSDLLAELFRREPKWVLSIEERFKFLVLGKSKGGTANGLRVHVFCPMQKEKRDAVRQIAERWKLSVHAAGWEPKRFLVVHVTPKSKVPARLLGSKGAVPLNVSHPPAFDPLVDMDLRLVVSLLDLPRDADISALVLRFGGECELVWLNDKNALAIFSDPARAATALRRLDHGSAYHGAVVVTQSGGASTASSGISAWGGAGVTKEGGTVAALKGNPWKKAIVQETNWREDSWGGEDWSSGGASDMQVPAWKGKEAPIPASRNRWNVLDPDTVSKSGGASSVGVENPGNHHMGSSSTAEPELKACGSNLTGQPQSSVDEAELLEVVDDWEKAYE* 1074
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl11g01620 1073 SMART znfxneu3 255 274 IPR000967 GO:0005634|GO:0008270
Eupl11g01620 1073 SMART znfxneu3 583 613 IPR000967 GO:0005634|GO:0008270
Eupl11g01620 1073 SMART znfxneu3 435 465 IPR000967 GO:0005634|GO:0008270
Eupl11g01620 1073 SMART znfxneu3 319 338 IPR000967 GO:0005634|GO:0008270
Eupl11g01620 1073 SMART znfxneu3 377 396 IPR000967 GO:0005634|GO:0008270
Eupl11g01620 1073 SMART znfxneu3 200 218 IPR000967 GO:0005634|GO:0008270
Eupl11g01620 1073 SMART znfxneu3 530 548 IPR000967 GO:0005634|GO:0008270
Eupl11g01620 1073 SMART znfxneu3 622 643 IPR000967 GO:0005634|GO:0008270
Eupl11g01620 1073 SMART znfxneu3 473 492 IPR000967 GO:0005634|GO:0008270
Eupl11g01620 1073 ProSiteProfiles R3H domain profile. 753 823 IPR001374 GO:0003676
Eupl11g01620 1073 CDD NF-X1-zinc-finger 177 238 - -
Eupl11g01620 1073 SUPERFAMILY RING/U-box 77 148 - -
Eupl11g01620 1073 Pfam R3H domain 754 820 IPR001374 GO:0003676
Eupl11g01620 1073 CDD NF-X1-zinc-finger 367 415 - -
Eupl11g01620 1073 MobiDBLite consensus disorder prediction 42 65 - -
Eupl11g01620 1073 CDD NF-X1-zinc-finger 245 293 - -
Eupl11g01620 1073 ProSiteProfiles Zinc finger PHD-type profile. 85 146 IPR019787 -
Eupl11g01620 1073 CDD NF-X1-zinc-finger 520 568 - -
Eupl11g01620 1073 PANTHER NUCLEAR TRANSCRIPTION FACTOR, X-BOX BINDING 1 NFX1 59 974 IPR034078 GO:0003700
Eupl11g01620 1073 CDD RING-CH-C4HC3_NFX1-like 87 144 - -
Eupl11g01620 1073 MobiDBLite consensus disorder prediction 1009 1056 - -
Eupl11g01620 1073 ProSiteProfiles Zinc finger RING-type profile. 88 144 IPR001841 -
Eupl11g01620 1073 MobiDBLite consensus disorder prediction 1009 1061 - -
Eupl11g01620 1073 Pfam NF-X1 type zinc finger 435 446 IPR000967 GO:0005634|GO:0008270
Eupl11g01620 1073 Pfam NF-X1 type zinc finger 473 490 IPR000967 GO:0005634|GO:0008270
Eupl11g01620 1073 Pfam NF-X1 type zinc finger 583 601 IPR000967 GO:0005634|GO:0008270
Eupl11g01620 1073 Pfam NF-X1 type zinc finger 530 547 IPR000967 GO:0005634|GO:0008270
Eupl11g01620 1073 Pfam NF-X1 type zinc finger 377 394 IPR000967 GO:0005634|GO:0008270
Eupl11g01620 1073 Pfam NF-X1 type zinc finger 255 273 IPR000967 GO:0005634|GO:0008270
Eupl11g01620 1073 Pfam NF-X1 type zinc finger 202 217 IPR000967 GO:0005634|GO:0008270
Eupl11g01620 1073 Pfam NF-X1 type zinc finger 319 336 IPR000967 GO:0005634|GO:0008270
Eupl11g01620 1073 CDD NF-X1-zinc-finger 309 352 - -
Eupl11g01620 1073 ProSitePatterns Zinc finger PHD-type signature. 88 143 IPR019786 -
Eupl11g01620 1073 CDD NF-X1-zinc-finger 463 515 - -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-X1 Eupl11g01620 R3H 2.9e-06 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl11g01620 K12236 - ming:122079132 1654.42