Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl11g01612 ATGGAAGATCGCCCACCCGGTTTTCGTTTCTACCCAACAGAAGAAGAGCTGGTTTCTTTCTACCTACATAACAAACTAGAAGGGATGAGAAAGGACTTAGACCGTGTTATCCCTGTTGTAGACATTTATGAGTTTGATCCATGGCACCTCCCACAGATTTCGGGAGAGGTATGTAATAGAGACCCTGAGCAGTGGTTTTTCTTCACACCCAGACAAGAAAGAGAAGCCCGAGGAGGGAGACCGAACCTAACCACGAGTTCAGGATACTGGAAAGCTACAGGCTCTCCTGGTTATGTTTACTCATCTGGTAACCGAGTTATCGGTTTGAAGAAAACAATGGTTTTCTACAAAGGAAAAGCTCCTACTGGAAGGAAAACCAAATGGAAGATGAATGAGTACAGAGCCATCGAAGGAGAAGCTACAGCATCAAGTAGTGTAATACCAAAGCTACGACACGAATTCAGCCTGTGTCGAGTGTATGTGACATCTGGTTGTTTGCGAGCATTCGATCGTCGTCCATCTGAAGCCACAACAAGTATTGAGACTACCCCAATTCAACAAATAATTCACGGGGATGGAGCCACAACATCTCATCAGAACCCTCCGACCACAGAAAAAACCAGCTCACCTGATAGTTTGTCTTCCGGAGCTCATGCATCTCAGACTGGAGAAGCTGCTGATTGGGAGATGGCTGAAGATCTCAACCCTCTATGGGAATGGGAGCAATTGAATTGGTTCTAA 741 0.4561 MEDRPPGFRFYPTEEELVSFYLHNKLEGMRKDLDRVIPVVDIYEFDPWHLPQISGEVCNRDPEQWFFFTPRQEREARGGRPNLTTSSGYWKATGSPGYVYSSGNRVIGLKKTMVFYKGKAPTGRKTKWKMNEYRAIEGEATASSSVIPKLRHEFSLCRVYVTSGCLRAFDRRPSEATTSIETTPIQQIIHGDGATTSHQNPPTTEKTSSPDSLSSGAHASQTGEAADWEMAEDLNPLWEWEQLNWF* 247
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl11g01612 246 Gene3D NAC domain 13 164 IPR036093 GO:0003677|GO:0006355
Eupl11g01612 246 SUPERFAMILY NAC domain 4 162 IPR036093 GO:0003677|GO:0006355
Eupl11g01612 246 Pfam No apical meristem (NAM) protein 5 134 IPR003441 GO:0003677|GO:0006355
Eupl11g01612 246 MobiDBLite consensus disorder prediction 175 221 - -
Eupl11g01612 246 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 4 206 - -
Eupl11g01612 246 MobiDBLite consensus disorder prediction 175 223 - -
Eupl11g01612 246 ProSiteProfiles NAC domain profile. 4 162 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl11g01612 Eupl-Chr11 31417659 31419733 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl11g01612 7 245 NAC Transcription Factor Family AT5G22380 56.379 3.71e-89 261
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Eupl11g01612 NAM 1.2e-32 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl11g01612 - - nnu:104607634 385.956