Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl11g01593 ATGCCCTCTCTCTCTCTTTTTTCTCGAGTTTTCTGTAAGAGCTCTTCGGCCATGCCAATTATCCATTATAATTACTGCTACAGCGATCCAATTCTAAACCCAACCAACACATTTCCTTCAAAGCTCCCGTTAATCACGAACTCTGCAACTCCGTCTATTAAGAAATTTGGATTCTCGAAGTTATCTCCTATTCCCTCTCTCAAAAGCAGCTTCTTTGGTGCGAGTTCGAGGGATTCGAGATTTCTTCGCGGAGAGGAACGCATTCGGAACCCTAATTTTCCTTTAGTTAGTGGTCGCAGCAGCGTAATTAGGGATGCGGCTGTTTCCGATTACTACTACACGTTGAATCTCAGTAGAAATGCGACGTTGCAGGAAATCAAGACCTCTTACAGAAAACTCGCTCGTCAGTATCATCCAGATTTGAACAAGAGTCCCGAGGCAGAAGAAAAGTTCAAAGAGATCAGTGCTGCATATGAGGTCCTATCAGACGATGAGAAAAGATCTTTATATGATCGCTTTGGTGCGGTAGGTTTACAGGGAGAATATGATGGATCAGGTGTTGGTTCTCAGGGGGTGGACCCTTTTGAAGTCTTTGATGCATACTTTGGCGAGCCAAGTGGTTTTTTTGGAGGTAGCAATTTGAGAAACAAGAACAACCAAAGTCTTGACATTCGGTATGACCTGTCATTGAGCTTTGAAGAATCAATTTTTGGAGGACAGCGGGACATTGAAGTTTCTTGTTTTGAAACATGTGATGATTGCAATGGGACCGGTGCAAAATCTAGCAGTTGCATAAAATCATGTCCGGATTGTGGTGGTAGGGGAGGGGTGATGAAAACTCAGAGAACACCATTTGGTGTAATGTCTCAGGTATCTACTTGTATAAAATGTGGTGGTGATGGCAAGATAATCACTGATCATTGCCGAAGTTGCAGTGGCCAAGGTAGAGTGCAGTCGAAGAGAAGTATCAAAATAGTCATCCCACCTGGTGTTAATGATAGAGCCACCATGCAAGTTCAAGGAGAAGGAAATTTTGATAGAAAAAGGGGCATAGCAGGTGATCTCTATTTATTCGTTCACATCGAGGAAAGACCTGGAGTTCGGAGGGATGGTCTTAACCTTTACTCAAATATTGCTATTGATTACACTGAGGCAATACTAGGGACTGTTGTCAAGGTGGAAACAGTCGAGGGCTTGAGAGATCTTCAAATTCCTTCTGGGATTCAGCCAGGAAATACAATAAAATTGCCCTCTATGGGGGTTCCAAACATTAAGAAACCTTCCGTTCGAGGCGATCATCACTTTATTGTGAACGTTGAGATCCCAAAAGATGTCAGGGAGAATTCTTTGATAATCCTGGAAGGTATGAGAAATTGGCCGGCAAGCTTAATTACCTCACCGTCACTAGACCGGATATTTCTTTCACAATTAGTGTGTGTTGCGGAACGCGTGCTTGTTGAAAAGTTGGCTTCACTGAAGGCATCATGCAAATCCAATGGGACTGTTGGAGGCGACCATGACAAACATAAGATGAAAAACCGACAAAACCGTCCTTCAAGCGAAGGGATCGAACAGGTTACGTCTTTGTGGAGCTCAATCAAGAATTTCTTGGGGCAAAATAAATCTCAAACGGGATTTGCATCAGTTGGTGTGGAAGCATCGGCACCAATATGGGCTTGTAGCAGACCAGATCCGTCACTTGTGATTTCTATTTCTATGGTTTTGGTTGTAACATGTATCTATTCCTTGGTGGGTATGATCGATTCTTGCACATCGTTAAAACAGGGAAGCTGTTCTCCTCCTTCGAGAGCAACAAAAGATCACTTAACGGGTTCATCCAGGTAG 1845 0.4331 MPSLSLFSRVFCKSSSAMPIIHYNYCYSDPILNPTNTFPSKLPLITNSATPSIKKFGFSKLSPIPSLKSSFFGASSRDSRFLRGEERIRNPNFPLVSGRSSVIRDAAVSDYYYTLNLSRNATLQEIKTSYRKLARQYHPDLNKSPEAEEKFKEISAAYEVLSDDEKRSLYDRFGAVGLQGEYDGSGVGSQGVDPFEVFDAYFGEPSGFFGGSNLRNKNNQSLDIRYDLSLSFEESIFGGQRDIEVSCFETCDDCNGTGAKSSSCIKSCPDCGGRGGVMKTQRTPFGVMSQVSTCIKCGGDGKIITDHCRSCSGQGRVQSKRSIKIVIPPGVNDRATMQVQGEGNFDRKRGIAGDLYLFVHIEERPGVRRDGLNLYSNIAIDYTEAILGTVVKVETVEGLRDLQIPSGIQPGNTIKLPSMGVPNIKKPSVRGDHHFIVNVEIPKDVRENSLIILEGMRNWPASLITSPSLDRIFLSQLVCVAERVLVEKLASLKASCKSNGTVGGDHDKHKMKNRQNRPSSEGIEQVTSLWSSIKNFLGQNKSQTGFASVGVEASAPIWACSRPDPSLVISISMVLVVTCIYSLVGMIDSCTSLKQGSCSPPSRATKDHLTGSSR* 615
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl11g01593 614 PRINTS DnaJ domain signature 112 130 IPR001623 -
Eupl11g01593 614 PRINTS DnaJ domain signature 130 145 IPR001623 -
Eupl11g01593 614 PRINTS DnaJ domain signature 166 185 IPR001623 -
Eupl11g01593 614 PRINTS DnaJ domain signature 146 166 IPR001623 -
Eupl11g01593 614 SMART dnaj_3 109 166 IPR001623 -
Eupl11g01593 614 Pfam DnaJ C terminal domain 224 442 IPR002939 -
Eupl11g01593 614 CDD DnaJ_zf 251 315 IPR001305 GO:0031072|GO:0051082
Eupl11g01593 614 MobiDBLite consensus disorder prediction 502 517 - -
Eupl11g01593 614 MobiDBLite consensus disorder prediction 500 521 - -
Eupl11g01593 614 Hamap Chaperone protein DnaJ [dnaJ]. 107 492 IPR012724 GO:0005524|GO:0006457|GO:0009408|GO:0051082
Eupl11g01593 614 SUPERFAMILY Chaperone J-domain 107 211 IPR036869 -
Eupl11g01593 614 ProSiteProfiles Zinc finger CR-type profile. 238 320 IPR001305 GO:0031072|GO:0051082
Eupl11g01593 614 FunFam Molecular chaperone DnaJ 243 320 - -
Eupl11g01593 614 SUPERFAMILY HSP40/DnaJ peptide-binding domain 368 445 IPR008971 GO:0006457|GO:0051082
Eupl11g01593 614 SUPERFAMILY DnaJ/Hsp40 cysteine-rich domain 238 318 IPR036410 -
Eupl11g01593 614 Gene3D - 251 315 - -
Eupl11g01593 614 CDD DnaJ_C 223 444 - -
Eupl11g01593 614 PANTHER DNAJ HOMOLOG 1, MITOCHONDRIAL-RELATED 66 494 - -
Eupl11g01593 614 ProSitePatterns Nt-dnaJ domain signature. 151 170 IPR018253 -
Eupl11g01593 614 Gene3D DnaJ domain 107 213 IPR036869 -
Eupl11g01593 614 CDD DnaJ 110 163 IPR001623 -
Eupl11g01593 614 ProSiteProfiles dnaJ domain profile. 110 174 IPR001623 -
Eupl11g01593 614 Pfam DnaJ domain 110 171 IPR001623 -
Eupl11g01593 614 SUPERFAMILY HSP40/DnaJ peptide-binding domain 223 362 IPR008971 GO:0006457|GO:0051082
Eupl11g01593 614 Gene3D - 367 457 - -
Eupl11g01593 614 Gene3D - 223 356 - -
Eupl11g01593 614 Pfam DnaJ central domain 251 315 IPR001305 GO:0031072|GO:0051082
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl11g01593 Eupl-Chr11 29557746 29634646 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl11g01593 81 194 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT5G64360 33.913 1.26e-07 52.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl11g01593 K03686 - nnu:104607386 725.702