Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl11g01567 ATGGGGTCTTACTCTCATCTCACGTTGTTTCTCGTTGTTTTCCTCTGGTTTTTCCGTCTCGGAAAACCAGATCTTTCGTCGGACAGAAACGCTCTTCTCGCCCTCCGCTCTTTCGTCGGCGGAGGGAAATATCTCCCATGGAATGTAACGGAATCGACCCCATGCCCGTGGCAAGGCGTCAAGTGCGAGAGCAACCGCGTCACCGTTCTCCGACTTCCCGGCGAAGGACTCTACGGCGACATTCCGGCGGGTATTTTCGGAAATCTGACCCACCTCCGTACCCTTTCCCTCCGTCTCAACGCCTTGACCGGTAAACTCCCGTCAGATCTCGCTCTCTGTACCGACCTCCGCAACCTCTACTTGCAGGGAAACAAGTTCACTGGCGAGATCCCGGCGTTTTTGTTCGAACTTCACAACCTCGTTCGCCTGAATCTTGCCGGAAATAACTTCTCCGGTGAGATCTCACTGGCGTTCAACAACCTCACCAGGTTGGGGACTATGTACTTGGAGAGCAATCTATTTACAGGTTCAATCCCAGAGCTGAATCTTGTCAATCTTGTTCAGTTCAATGTTTCGTACAATCGATTAAACGGTTCAATCCCTTCAAATCTCCGATCGATGAAAGCGGATGCTTTCCTAGGGAATTCGCTCTGCGGTGAGCCTCTCGGGTTATGCCCTAATGAAAGATTCTCGGTCAACAATGGCGAAAAGAAAAAGAAGTTGTCAGGGGGAGCAATTGCCGGAATTGCAGTCGGATCGGTGATTGGGTTTCTGTTGATTCTTCTCGTTCTCTTTGTTTTGTGTCGGAAGAAGAGTAGTGGGAAGACGAGATCGGTCGACATTGCTTCAGTGAAGCACCCGTCGGAATTGGAAATTCCGGGAGAGAAACCACTGGGAGAGGGGGAGAATGGGAGTGGTAGGTATCCAGCAGCAGCGGCAACAACAATGGCAGCAGCGGCGACAACGGCGAAGGGGGAAATTAACAATGGTAGCAACAAGAAGTTGTTGTTCTTCGGGAATGCGGCTAGGCATTTCGATCTTGAGGATCTGTTGAGGGCTTCAGCCGAGGTTCTAGGGAAGGGGACGTTTGGGACTGCGTACAAGGCAGTTTTGGAGATGGGGACTGTTGTGGCTGTGAAGAGGTTGAAGGATGTTACCATCCCGGAGAAGGAATTCAGAGAGAAAATCGAGGTTGTTGGATCGATGGATCAGGAAAATCTAGTACCACTTAGAGCCTACTATTACAGCAAGGATGAGAAGCTCCTTGTCTATGACTACATGTCCATGGGAAGCTTATCTGCACTTTTGCATGGAAACAGAGGAGCAGGTAGGACTCCATTGAATTGGGAGACCCGATCCGGCATTGCCCTTGGAGCTGCCCGCGGCATCGAATACCTCCATTCGCAGGGCCCTAACATCTCCCATGGCAACATCAAATCCTCCAATGTCCTCCTCACCAAATCTTATGATGCTCGTGTCTCCGACTTCGGCCTCGCACACCTTGTTGGTCCCACTTCCACTCCCAACCGTGTTGCGGGCTACCGCGCACCAGAGGTGACAGATGCCCGCAAGGTCTCTCAGAAGGCTGATGTTTACAGCTTCGGCGTTCTGCTCTTGGAGCTGCTGACGGGTAAGGCCCCCACCCATGCCCTCTTGAACGAGGAGGGGGTCGATCTCCCGAGGTGGGTTCAATCTGTGGTTCGAGAGGAATGGACCGCTGAGGTATTCGACCTTGAGCTCCTGAGGTACCAGAACGTTGAGGAGGAGATGGTTCAGCTCCTACAGCTTGCAATAGACTGTGCTGCTCAGTACCCCGACAAACGACCTTCAATGTCCGAGGTGGCACGGCGGATTGAGGATCTCCGTCGCTCCACCGTACGACAAGAGCAAGACTCGCAGCCCCATCTTGTCGATGATCCAGATGATGGGTCATCTAATCGAACCAATTCAGTCGGATCAGGCCAGCCACCATCATCGCTAATGGATTGA 1989 0.5229 MGSYSHLTLFLVVFLWFFRLGKPDLSSDRNALLALRSFVGGGKYLPWNVTESTPCPWQGVKCESNRVTVLRLPGEGLYGDIPAGIFGNLTHLRTLSLRLNALTGKLPSDLALCTDLRNLYLQGNKFTGEIPAFLFELHNLVRLNLAGNNFSGEISLAFNNLTRLGTMYLESNLFTGSIPELNLVNLVQFNVSYNRLNGSIPSNLRSMKADAFLGNSLCGEPLGLCPNERFSVNNGEKKKKLSGGAIAGIAVGSVIGFLLILLVLFVLCRKKSSGKTRSVDIASVKHPSELEIPGEKPLGEGENGSGRYPAAAATTMAAAATTAKGEINNGSNKKLLFFGNAARHFDLEDLLRASAEVLGKGTFGTAYKAVLEMGTVVAVKRLKDVTIPEKEFREKIEVVGSMDQENLVPLRAYYYSKDEKLLVYDYMSMGSLSALLHGNRGAGRTPLNWETRSGIALGAARGIEYLHSQGPNISHGNIKSSNVLLTKSYDARVSDFGLAHLVGPTSTPNRVAGYRAPEVTDARKVSQKADVYSFGVLLLELLTGKAPTHALLNEEGVDLPRWVQSVVREEWTAEVFDLELLRYQNVEEEMVQLLQLAIDCAAQYPDKRPSMSEVARRIEDLRRSTVRQEQDSQPHLVDDPDDGSSNRTNSVGSGQPPSSLMD* 663
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl11g01567 662 MobiDBLite consensus disorder prediction 619 642 - -
Eupl11g01567 662 MobiDBLite consensus disorder prediction 619 662 - -
Eupl11g01567 662 ProSiteProfiles Protein kinase domain profile. 352 636 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl11g01567 662 MobiDBLite consensus disorder prediction 643 662 - -
Eupl11g01567 662 ProSitePatterns Protein kinases ATP-binding region signature. 358 380 IPR017441 GO:0005524
Eupl11g01567 662 FunFam pollen receptor-like kinase 1 321 426 - -
Eupl11g01567 662 Pfam Leucine rich repeat N-terminal domain 26 62 IPR013210 -
Eupl11g01567 662 CDD STKc_IRAK 358 621 - -
Eupl11g01567 662 SUPERFAMILY Protein kinase-like (PK-like) 356 640 IPR011009 -
Eupl11g01567 662 SUPERFAMILY L domain-like 27 207 - -
Eupl11g01567 662 FunFam Probable inactive receptor kinase At1g48480 427 630 - -
Eupl11g01567 662 Gene3D Ribonuclease Inhibitor 25 237 IPR032675 -
Eupl11g01567 662 FunFam Probable inactive receptor kinase RLK902 25 182 - -
Eupl11g01567 662 Pfam Protein kinase domain 355 615 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl11g01567 662 PANTHER OS05G0588300 PROTEIN 9 631 - -
Eupl11g01567 662 Gene3D Phosphorylase Kinase; domain 1 317 426 - -
Eupl11g01567 662 Gene3D Transferase(Phosphotransferase) domain 1 427 643 - -
Eupl11g01567 662 Pfam Leucine rich repeat 78 126 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl11g01567 Eupl-Chr11 27531734 27534817 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl11g01567 24 622 Receptor kinase-like Gene Family AT1G48480 64.078 0.0 786
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Eupl11g01567 Pkinase 2.7e-39 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl11g01567 - - ming:122081960 940.258