Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl11g01563 ATGGAGAGAGATTTCTTGGGTTTGAATTTGAAGGATTCGTCAGCGATGCTGGAAGAGGAGATTAAAGATGGATGCAAAGATACTGCATTCATGAGAGGTTCTGGGATGCAGTGGCCCTTCTCCAACAAGGTTTCTGCCCTTCCTCACTTCATGTCTTTCAAAACTGTTCAAGAAGAGAGGCCCAAAAAAATGGTATTTGATCCCCTTGCCTCTTCTGGGTTTATGCCTATATCAACTGCGGACGCGTTTGATGCTAATCACAAGGCCTTTGCTAATGTAGTCCAGAAAAACTTTAGTTTCGATAGGCAAGGGGGTACTCCTTATGGAATGACAGCTTATCCCATGCAGCATGCTGACGCACATTCAGCCCATCGTCCTCACGATATTAGGTCGTTCTCGCTCTCCAACCATACGATTTCGGTTGCTATGGGCAACCCTTTCTTTAAGTCCCATGTTGGCACAACCAGCCACAACTTGGCTCCTACCCTTCTGAAGCAACAACCACTTGGTGGAATTCCGGTTATGACTTCGCATTCCATTGTTCCAAGTGCCACACCTGTGTCTGGGACGACTGATCAGAGAAACATTTCTAAGCCCAAAGGGGCACCTACTCAACTGACCATCTTTTATGCGGGTTCAGTGAACGTCTATGACGATATCTCCCCTGAGAAGGCTCAAGCTATTATGCTCTTGGCTGGGAATGGGTCTTCGATGAATGCTAACACGGCAACTCCCAGAGCTCATGTGCAGGCACCAACCCCCAAGCCGGTAGGAGGTGATGGTGTTCTTGGGAACCAGTCCCATTCTACATCGCCTTGTTCAGGTCTTTCAAGTCCAATGTCTGTCACTTCACATGCTGGTGCTCAGTCAGGGAGTGGATCTAGCGGCACTGATGAACTGATGGCAGCAAAATCCATAGGAGCATTGATGGCACCTAGTAGCCAACCAGAGCCTCCAAAAACAGTCACTTCACTAGGATCTGCTGCTCCATCTATGATGCCTGCAGCTGTGCCTCAGGCTCGGAAAGCATCCTTGGCTCGATTTCTGGAGAAGCGCAAGGAGAGGGTGATGAACACAGCCCCTTATAACATGAGCAAGAAATCGCCAGACGGCAGCAGCACCTCCCCTGGATCCAACGGTATCAGTTTCCCGGGCAATTCTGGTGCAGGTTATATTCCAGCCAGCAAGGAACATTCATGGTGCTCAGTGCCGCCGACAAAGAATGAGGGCAACAATGGAAACTTGCACACTGCGGTGGAGATGTAA 1266 0.4929 MERDFLGLNLKDSSAMLEEEIKDGCKDTAFMRGSGMQWPFSNKVSALPHFMSFKTVQEERPKKMVFDPLASSGFMPISTADAFDANHKAFANVVQKNFSFDRQGGTPYGMTAYPMQHADAHSAHRPHDIRSFSLSNHTISVAMGNPFFKSHVGTTSHNLAPTLLKQQPLGGIPVMTSHSIVPSATPVSGTTDQRNISKPKGAPTQLTIFYAGSVNVYDDISPEKAQAIMLLAGNGSSMNANTATPRAHVQAPTPKPVGGDGVLGNQSHSTSPCSGLSSPMSVTSHAGAQSGSGSSGTDELMAAKSIGALMAPSSQPEPPKTVTSLGSAAPSMMPAAVPQARKASLARFLEKRKERVMNTAPYNMSKKSPDGSSTSPGSNGISFPGNSGAGYIPASKEHSWCSVPPTKNEGNNGNLHTAVEM* 422
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl11g01563 421 ProSiteProfiles Tify domain profile. 199 234 IPR010399 -
Eupl11g01563 421 SMART tify_2 199 234 IPR010399 -
Eupl11g01563 421 MobiDBLite consensus disorder prediction 310 338 - -
Eupl11g01563 421 MobiDBLite consensus disorder prediction 361 389 - -
Eupl11g01563 421 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 127 373 IPR040390 -
Eupl11g01563 421 MobiDBLite consensus disorder prediction 361 385 - -
Eupl11g01563 421 Pfam Jas motif 338 362 IPR018467 -
Eupl11g01563 421 MobiDBLite consensus disorder prediction 263 298 - -
Eupl11g01563 421 Pfam tify domain 202 233 IPR010399 -
Eupl11g01563 421 MobiDBLite consensus disorder prediction 241 298 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl11g01563 Eupl-Chr11 27278718 27283042 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl11g01563 36 368 Tify Gene Family AT3G17860 39.181 1.95e-47 163
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Eupl11g01563 tify 1.1e-17 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl11g01563 K13464 - nnu:104605341 491.115