Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl11g01561 ATGGCACAGCTCGGTCGGTTGGAAACCAATAGGAGCCTAGAGAGCCTATTAGGCATGGACAAGTCGGTCTACGATGTACGACCAACCATCACCCATGGAGCAAACAAGATGCTTCGAGGCCAAGGACTTGAATTTGAGAACTTATCTTATAGTGTCATGAAGAAGACGAAGAAGGATGGCGTGTGGATAACAAAAGAAGCCTATCTCCTTAACGACATCTCCGGCCAAGCAATAAGAGGTGAAATCATGGCCATCATGGGACCTAGTGGCGCCGGAAAATCCACTTTTCTTGATGCTATAGCTGGACGGATCGCGCAGGGGAGCCTTGAAGGATCTGTTAGCATCGATGGAAGACCAGTGACCACGAGCTACATGAAGAAGGTGTCGTCGTATGTGATGCAAGATGATCAGCTCTTCCCCATGTTGACGGTCTTCGAGACCTTCATGTTCGCAGCTGAGGTGAGGCTTCCTCCTTCCATTTCAAGGGCAGAAAAGAAGAGAAGAGTCTACGAGCTCCTTGAACAACTGGGTTTACAGAGTACAACACATACATATATCGGCGACGACGGGAGGAGAGGAGTGTCGGGTGGTGAACGGCGGAGGGTGTCTATTGGGATCGACATAATCCACAAACCATCATTGCTGTTCCTCGATGAACCCACGTCGGGCCTTGATTCGACCAGCGCTTACAGTGTGGTGGATAAGGTGAAAGACATCGCTAAGAGTGGTAGCATCGTCCTCATGACCATCCACCAGCCCTCATTTAGAATCCAGATGCTCCTAGACCGGATCACCGTCTTGGCAAGGGGTAGACTGATATATTTGGGAAGCCCAACTGCTCTTCCAGCTCACCTCTCTGGATTTGGAAGGCCAGTCCCCGATGGAGAGAACAGCATGGAATATCTCTTGGACGTGATCAAAGAGTACGATGAATCAACAGTGGGGCTCGATCCCCTCGTTCTCTACCTACGTGATGGCATCAAGCCTGATCAAGTGGCCAGGACACCTATCCCTAAAACACCCAAGACACCACGCACCCCCTACAGAAAGACTCCCGTCTCCAAACATATCCACCTCCGAAGCCGAGCCTTTTCCATGGGAAATCAGACACCCGGCCCGAATTCTACCCAGTTTGAATTCTATGATGATGATGATGACTTTGACAACTCACTTGAACGTAAGAGTCGGACACCCATGACCATGCACAGTGGAGTCTACAACCCACGTTTGGCTTCTCATTTTTACAAAGACTTCTCTGTCTGGCTATACCATGGTGTCAAAGGTGAGCCTCGTCGTCCACCCTCTTGGACTCCAGCAAGAACCCCTGGCCGGACTCCTGGCAAAACACCACATGTCGGTCCAAGAAGCCAAATTTCAAGCCAATTCTCGACACCCCAGCAACCTCCTCGCCCCAAGACTCCAGTAATCTTCAACCCATCCCCTGACCCCTATGCAGCATCCTATGCACCATCCTATGAAGATTTAGACATGGATGTGCTTGATGAGCTTGACGACGGCCCCAAATTTGCTAACCCGTGGCTCCGTGAGGTTGTAGTCCTCTCATGGCGCACCGCACTTAATGTGATACGCACCCCGGAACTCTTCCTATCACGTGAGATTGTCTTGACAGTCATGGCAATCATTCTCTCCACCCTCTTCTGGAACCTCCATGCTCACGACTTCAAGACCATCAACCGACTTCTCAATTTCTATATCTTCGCCGTCTGTCTCGTTTTCTTTTCCTCCAATGATGCCGTGCCTACCTTCATCCAAGAGCGATTCATCTTCATCAGAGAGACCTCTCACAATGCTTATCGGGCCTCCTCTTACGTTATCTCCTCCCTCATTGTCTATCTCCCATTCTTCGCAATTCAAGGTTTCACATTTGCAATCATCACAAAGCTTATCCTCCACCTAAATAGCAACCTCTTCTACTTCTGGCTGATCCTCTTCTCCTCGCTCATAACCACCAATGCTTATGTTATGCTTGTCAGTGCACTTGTACCAAGTTACATTACAGGATATGCTGTCGTGATCGCCACCACCGCACTTTTCTTCCTGACCTGTGGTTTCTTCTTGAAGAGATCTCAGATACCCGTGTACTGGAGTTGGCTACACTACATCTCAGCAATCAAATACCCATTCGAGGCCTTGCTAACAAATGAATTCAAGGGAACAACTTGTTACAATGGAAGCTACGCAGATCTGTCGCCAGGCCCACTGGGTAAAGTAAATATCAGCAAATTGCATACGCCAGATTTTCCGGCAACTTGCATGTTGATAGGGGAAGACATTCTCTTCTCCATGGATATACGGATGGAGAACATTTGGTATGATATTGCTATCTTACTCGCCTGGGGTGTTCTTTATCGGCTCTTCTTCTACCTGGTTCTAAGATTCTATTCCAAGAACGTGAGGAAATGA 2424 0.4872 MAQLGRLETNRSLESLLGMDKSVYDVRPTITHGANKMLRGQGLEFENLSYSVMKKTKKDGVWITKEAYLLNDISGQAIRGEIMAIMGPSGAGKSTFLDAIAGRIAQGSLEGSVSIDGRPVTTSYMKKVSSYVMQDDQLFPMLTVFETFMFAAEVRLPPSISRAEKKRRVYELLEQLGLQSTTHTYIGDDGRRGVSGGERRRVSIGIDIIHKPSLLFLDEPTSGLDSTSAYSVVDKVKDIAKSGSIVLMTIHQPSFRIQMLLDRITVLARGRLIYLGSPTALPAHLSGFGRPVPDGENSMEYLLDVIKEYDESTVGLDPLVLYLRDGIKPDQVARTPIPKTPKTPRTPYRKTPVSKHIHLRSRAFSMGNQTPGPNSTQFEFYDDDDDFDNSLERKSRTPMTMHSGVYNPRLASHFYKDFSVWLYHGVKGEPRRPPSWTPARTPGRTPGKTPHVGPRSQISSQFSTPQQPPRPKTPVIFNPSPDPYAASYAPSYEDLDMDVLDELDDGPKFANPWLREVVVLSWRTALNVIRTPELFLSREIVLTVMAIILSTLFWNLHAHDFKTINRLLNFYIFAVCLVFFSSNDAVPTFIQERFIFIRETSHNAYRASSYVISSLIVYLPFFAIQGFTFAIITKLILHLNSNLFYFWLILFSSLITTNAYVMLVSALVPSYITGYAVVIATTALFFLTCGFFLKRSQIPVYWSWLHYISAIKYPFEALLTNEFKGTTCYNGSYADLSPGPLGKVNISKLHTPDFPATCMLIGEDILFSMDIRMENIWYDIAILLAWGVLYRLFFYLVLRFYSKNVRK* 808
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl11g01561 807 SMART AAA_5 79 279 IPR003593 GO:0016887
Eupl11g01561 807 MobiDBLite consensus disorder prediction 332 354 - -
Eupl11g01561 807 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 38 794 - -
Eupl11g01561 807 ProSitePatterns ABC transporters family signature. 194 208 IPR017871 GO:0005524|GO:0016887
Eupl11g01561 807 MobiDBLite consensus disorder prediction 429 481 - -
Eupl11g01561 807 Pfam ABC transporter 70 222 IPR003439 GO:0005524
Eupl11g01561 807 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 44 284 IPR027417 -
Eupl11g01561 807 Gene3D - 42 287 IPR027417 -
Eupl11g01561 807 MobiDBLite consensus disorder prediction 452 466 - -
Eupl11g01561 807 Pfam ABC-2 type transporter 517 723 IPR013525 GO:0016020|GO:0140359
Eupl11g01561 807 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 43 294 IPR003439 GO:0005524
Eupl11g01561 807 CDD ABCG_EPDR 40 276 - -
Eupl11g01561 807 FunFam ABC transporter G family member 6 58 285 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl11g01561 Eupl-Chr11 27175063 27177808 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl11g01561 23 387 Calmodulin-binding Proteins AT2G36910 22.581 1.12e-09 60.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl11g01561 K05681 - csin:114284686 1217.22