LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Eupl11g01559	ATGTTTTATTTGAATCCCTTTGTGTGTTTTTCTCTGGTTCTTGAGAGTCTTCTTCTAGTTATTCTCCTTGGTACTGATGCTGTTATTCAAGTAAGTTGCTTGAACTTCACTTATCCAAGCTTCCCAAAGCAAACGGCATCAGATTTCATAACCACAGACCACTCGCAAATAGTTGAGCAAGCCCTCCAAGTGACAAGCGATACACATGGTGCTCCTATTTTTAATTTGTCTGGAAGAGTCTTGTATAGACAAAAATTCAAGTTATGGAGCAAAGCAAAAAGCTCTATCGCTTCCTTCAACTCTACCTTCGTACTCAATATCACTCCCATGATCCAGCCCGGGGGTGAGGGCTTGGCCTTCATATTGACGGGAGATCAAGAAATTCCCATTAATAGTGAGGGACAATGGCTTGGGATCGTAAACGCAAGTACCAACGGGTCCTCTCAAGGTCACATAGTTGCCGTAGAATTCGACACGAGGAAGAGCTACGTGGAAGATGTCGATGACAACCATGTAGGTGTGGATGTTAATAGCATCAACTCCATCAGTCAATTTCAATTGAGTAGCCATGGTGTCAATCTTTCGAGTGGAAAAGATGTGATCGCTAGTATTCGATACGATGGGAAGTCGGGAAGAATGGTTATCTTTGTTTCCATGAACAATGGAACTGGATTCAGCTCAATGAAACCCACAATTTCATTACAGCTCCAACTCTCCAAGCATCTTCCGGAGGATGTTTACGTGGGCTTCTCAGCTTCCACGGGAGACCTCACTGAACTTAACTGTGTAAAGTCATGGAATTTCACTGGTGAAGACATAGAAGGCGGAAGTTCTAATCATCTATTATGGGTTTGGATTATAATTCCAGTGCTGATACTCCTATTCGTTGGGTTCGCATGTTTCGTATGTTTGAGAAGAAAACCTGAGAAGGACCAAAATGAAGCTATCGATCAAGATATAGAAAAAGAGATTGAAGGTTCAACAATGGTACCCCATAAGTTCCTACTGACGGAACTCAAATCTGCAACCAGGAATTTCCACTACAGGAACAAGCTTGGGAAAGGAGGGTTTGGGACAGTTTACAAAGGATTCTTGAAGGAGATCAACATGGAGGTCGCCGTAAAAAGAGTGTCGAAGGATTCACGACAAGGCAAGCAAGAATTCATGGCAGAGGTTACAACGATCAGCCACCTCGATCATAAGAATATTGTGAAATTAATCGGGTGGTGTTATCAAAGCGATGAGCTCCTTCTTGTATATAAATTCATGCCCAATGGGAGCTTAGACAAGCGCATATTTTCTGAAGAGAACCCAACAGAGATACTGAGTTGGGAAAGAAGGTACAATATAATCTATGGAGTGGCATCTGCACTGGATTATCTTCATGATGGGTGTGAGAAGAGGGTGTTGCACCGCGACATAAAAGCCAGCAATGTAATGTTGGATTCCGAGTTCAACGCTCGTCTCGGGGACTTCGGATTGGCTCGAACTGTTCAAAATTATGGGGAAACTCATCATTCCACAAAAGAAATAGCTGGAACACCTGGCTATATGGCTCCAGAATGTTGCCTGACTGGTAGAGCGAGCGTCGAAACAGATGTTTATGGGTTCGGTGTCTTGGTAATTGAAGTTGCATGTGGTCGAAAGCAAGTTAATGACCTTGAAAACCACCACAACAAAAGAATCAGCATTATTGACTGGGTATGGAACCTGTATGGGAAAGAGAGGATTTTTTATGCAGCAGATCCCAGATTGCAGAGTGACTTTGACAAGGAGCAAATGGAGTGCGTACTTAAGTTGGGGTTGGCATGTTGCCATCCAAATCCCAATCAGAGGCCGTCCATGAAAGTGGTATTGCAAGTTCTCACTGGTGAAACAGCTCCACCAATTCTACCGAATGTGAAACCTGCTTTTATGTGGCCAGTCATGGATTCTCTCCCGGATGATTCAGGGTTGTCTTTTAATGGTGGGCAACTGACTCAAAGCACAGATCTCAGTGGTAGATGA	2007	0.4345	MFYLNPFVCFSLVLESLLLVILLGTDAVIQVSCLNFTYPSFPKQTASDFITTDHSQIVEQALQVTSDTHGAPIFNLSGRVLYRQKFKLWSKAKSSIASFNSTFVLNITPMIQPGGEGLAFILTGDQEIPINSEGQWLGIVNASTNGSSQGHIVAVEFDTRKSYVEDVDDNHVGVDVNSINSISQFQLSSHGVNLSSGKDVIASIRYDGKSGRMVIFVSMNNGTGFSSMKPTISLQLQLSKHLPEDVYVGFSASTGDLTELNCVKSWNFTGEDIEGGSSNHLLWVWIIIPVLILLFVGFACFVCLRRKPEKDQNEAIDQDIEKEIEGSTMVPHKFLLTELKSATRNFHYRNKLGKGGFGTVYKGFLKEINMEVAVKRVSKDSRQGKQEFMAEVTTISHLDHKNIVKLIGWCYQSDELLLVYKFMPNGSLDKRIFSEENPTEILSWERRYNIIYGVASALDYLHDGCEKRVLHRDIKASNVMLDSEFNARLGDFGLARTVQNYGETHHSTKEIAGTPGYMAPECCLTGRASVETDVYGFGVLVIEVACGRKQVNDLENHHNKRISIIDWVWNLYGKERIFYAADPRLQSDFDKEQMECVLKLGLACCHPNPNQRPSMKVVLQVLTGETAPPILPNVKPAFMWPVMDSLPDDSGLSFNGGQLTQSTDLSGR*	669

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Eupl11g01559	668	Pfam	Legume lectin domain	34	273	IPR001220	GO:0030246
	Eupl11g01559	668	SUPERFAMILY	Concanavalin A-like lectins/glucanases	33	269	IPR013320	-
	Eupl11g01559	668	ProSitePatterns	Legume lectins beta-chain signature.	153	159	IPR019825	-
	Eupl11g01559	668	SMART	serkin_6	346	622	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Eupl11g01559	668	FunFam	Probable L-type lectin-domain containing receptor kinase S.5	33	277	-	-
	Eupl11g01559	668	ProSiteProfiles	Protein kinase domain profile.	346	631	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Eupl11g01559	668	Gene3D	Transferase(Phosphotransferase) domain 1	423	628	-	-
	Eupl11g01559	668	ProSitePatterns	Protein kinases ATP-binding region signature.	352	375	IPR017441	GO:0005524
	Eupl11g01559	668	CDD	STKc_IRAK	352	624	-	-
	Eupl11g01559	668	Gene3D	-	32	277	-	-
	Eupl11g01559	668	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	469	481	IPR008271	GO:0004672\|GO:0006468
	Eupl11g01559	668	SUPERFAMILY	Protein kinase-like (PK-like)	328	642	IPR011009	-
	Eupl11g01559	668	CDD	lectin_legume_LecRK_Arcelin_ConA	34	269	IPR001220	GO:0030246
	Eupl11g01559	668	PANTHER	-	55	632	-	-
	Eupl11g01559	668	Gene3D	Phosphorylase Kinase; domain 1	331	422	-	-
	Eupl11g01559	668	Pfam	Protein kinase domain	347	620	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Eupl11g01559	668	FunFam	serine/threonine-protein kinase PBS1-like	311	422	-	-
	Eupl11g01559	668	FunFam	probable L-type lectin-domain containing receptor kinase S.5	423	628	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Eupl11g01559	Eupl-Chr11	27083322	27085328	Dispersed/Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Eupl11g01559	34	648	Receptor kinase-like Gene Family	AT5G55830	37.805	2.54e-128	393

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_L-LEC	Eupl11g01559		Pkinase	3.1e-52	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Eupl11g01559	-		-	mof:131168197	744.577