Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl11g01557 ATGGCATCGTCGTCTCTGGAGGACCTTCTTGCAGAGGAAGGGTTCAATGGAAGGAAATACAAGACAAGATCACGAGCTTCATTTGGATCGGAAGGGGTAAGTATGCCGCTTTACCTTTATAGAGAACATAATCAGTTAGGTTCTGCATCTAGTGTTAGAATTAGGACGGAGAGAACCCGTTCTGATGTATCCCGGTATCAAAGGTCGAACAGTGAATTGCTCATAAGTGAGAGAGTTTCAGGTAGGAGAGCTAGGGACAATCTGCTTGAAAAATCAAAGAAAAAAGATTTAAAGGAAACTGAGAGATTCGCAGTTTCTAATTATGTGAAGGAAGTTAAGATATTTAACGTCAGCTCTTCATCAGATTTAGGGGAAATTGAGAGTGATGTGCGGGAGAGCGAGAGCTTTAAAGATATTTTTTCGAATGAGGTGCAGGAAAATGAGAGAGGGGGAGATAGATATTCTAATGGTTTGGAGGAAAAGGATAAATATAAGGGCAGATCTAACAAACTTCTGTTGGGACGCACGAGTTTCAGTGATAATTATCAAAAAAGCTTACAGCAACTTGATAGCTCTTCCAGCAAATCGAATAGAAGTTCACATAACAGCAAAAGCTTTGAAGATTTTAGGAGCCGAAAACATCTAGTTATTGAACAATCAGCTTCCGAACCTGCGCTTGATGAAGTTGCGATCCAAGCCATGGTTTCAATCCTAAGTGGTTATGTCAGACGTTTTCAGAAAGATAAGGATTTTCGAGAATCACTTCGTCAGAATTGTTTATCTTGTCTAGTTACCACAGATTCGGAAGAAGGCCATCATACCGACAGCAAAGTCATAGCCAATCTTGAACAGGCGATGGAAACAGTAGAAAGAGTTGCTGAGGAGTCTGGAAATGCAAAAGAATTGAAGAAAGCTTCTTTACAGCTGAGCGTCATTACGGGTTTGAATTCAAAGGATTTAAATGATGGGTTTACGTCTGGGATTCCCAATTCGCAGTTGTCAGCCTGTGCCCATCTCTACCTTGCTGTAATTTATAAGCTACAAAAGAAAGACAGGGTATCGGCGAAGCATGTTCTTCAAGTGTTCAGTGATTCACCCTCTAAAGCACGGACAAGTTTGTTGCCAGAACTGTGGGACAATCTTTTTCTTCCTCATCTTTCAGATTTGAGGGTGTGGTATGATCAAGAAGCCAAGTCCATACCAGAAACCTCAAGTAGGCCAAGGAAACTGAAGCTTCTTGAAAAAGTATATAATGAAATACTGGATTCTGGTACATGCCAGTTTGCAGTTTATTACAAGGATTGGCTCACAGAGGGAGTTGAAGCTCCTGCTATTCCCACTATTCAAATCCCTTCAATGTCTGTTCAGGGAGTTCTGCATGGAGGTTCACATGGACATTCTCCAGAGCTAGCAAGTCCAATTGGTTCTGTTTCATCTCAGCCAATGATCAGCAAAAAGCTATATGATGCTGTTTTTGGCGGACCAAATAAATTGGACGGTGTTGATGAAGTGGAAGTTGGAGAAGAGGAAGAGAACTTTGATAACTGTATGGGAAGCTTTGAGGGTACTTCTGAAGAAGATAAAAGAATAGTAACTTACTCTCCTGATCGAGGAAGGTATACAGGACAACTTATTCAAGAAGATACTATTGAAAGTACAGAAGCTGATGCAACTCATCATGTAGAGCGAGGAAGGTATACAGGACAGCTTATTCAAGAAGATACTACTGAGAGTACAGCAGCTGATGCAGCTCATCTTGCCAATGGACTGTTACCTACAGCTGAGGAAGGATGGAGATTACATACAGTGAATGTTCCCAGGGAAGAAGAGCTCAAGAATGAAGTTGAAAATATTCATATGTGGCGTACAACTCCAGGGAGCAACCTTATGCTACATGCGCTTCCACATACAAAGGCCAATGAGCTTGCCCTAAAGAAGCTAGCAGAATCTGTTTTCCAACTGCCGCAGGCTGAGGATCCCATCAATCTAACTACTGCTATACCTATATCACATCCTGAGGACATGCCCATGCATGATTCACATACAAATCTAAGCAACATAAGTTCCTACGTAGAAGGGAAATATGTAAATTATGAGTATTTTGAGGAAGGATCTTTTTTCTCAAACATTCCCAAGAATTTTATCTGCCCTTTAACTGGAGAGTTGTTTGAAGACCCAGTAACACTAGAGACTGGTCAAACCTTTGAGCGAACAGCCATTAAAGAATGGTTTGATAAAGGCAACAGAACATGCCCAATGACTAGAAGGAGATTGGAGTGCCTGGCAGTTCCAATTACTAATTTTGTTTTGAAAAGTGTTATTGATTGCTGGAAATCAGAGCACTGTAGAAATCTCTTGGCTTTGGCCTCTCAAATAGCAGGGAGCTCGTCTGAACGTGGGTTTAAATCCAAGGATGAAAGAGCTGTTTTTGTATTAGAGCAGCTTCTCATTGGTTTCAAAACGGAGGAAAGATTAATGAATGCCAAACACCTTATCTCTCTTGGAGGCTTGCAGTTTCTAATTAGGAGATTTGAATTGGGCAAATTGGAAGAGAAATCACGTGTTGTTGCACTTTTATCCTGTTGTATTGAAGCAGACGGAGGTTGCAGGAACTACTTATCAAAAAACATTAAAAAGGCATATCTTCTTGAGCTCCTCCACAACAAGCAAGTTAAATCAAGGGAAAATGTGGTGATGCTGCTGACTGAATTAATTTGCCTAAAAAGGAGGACCGAGATAACATCATTCTTAAGCAGCTTGCAGAAAGAGGGGATAATGAACACAATGCATGTTTTGCTTGTGTACCTCCAGAGCTCTCCACCTGAGCAAAGACCCCTGGTGGCTGTTCTTCTGTTGCACTTTGATCTTCTGGTAGAGTCTCGAAAGTATAGCATATATAGGGAGGAGGCTGTCGATAGTATTACAGTGGCTCTAGACGGCAGCTTAAATGATGAGAAAATTCGAGCACAGTGTTGCAGAGCACTTCTTATCTTAGGTGGAAAATTTTCTTTCTCTGGAGAGTTACTGACAGAGAATTGGCTCCTAAGGCAAGCAGGATTCTTTGATGGTTGCGAAACCAACTTTCTTGACAACGTTGAAGAGAGCTTGCAAATTGATGAAACAATTCAATGGGAGGAAGATGAAAAGGCAAGAGAAGATTGGTGGAAGAACTTGGCGGCATCACTGCTTGGTAATGGAAAGAAGTCATTTTTGGAGATCATTTCCAAATGCTTATGCTCTGGAAACATGAATTTGGTGAGGGTGTGCCTGGTCACTGTGGCATGGCTCAGCGAAGCACTTACCTTATTGTCAGATGCAGAGTTCCAGCTCTCTGCATTTGCATCTCTCATCCCTCAACTGAAAGAAAACTTGGAGAATGGCGAGCGGGTTGAACACAGGGTTCTCGCCTGCATGTCTCTGCACAATTTCAGCAAGATTTCAGAATGTAGGGTCCTACTGATGACGATTGCAGAAGAGATTTTGGTTCCTCTACGAAGCCTTGCAGAGGTAACTTGGACAGCGAAACATCTTCATGCAATTATTTCTGGGGAAGATCTGTAG 3561 0.4173 MASSSLEDLLAEEGFNGRKYKTRSRASFGSEGVSMPLYLYREHNQLGSASSVRIRTERTRSDVSRYQRSNSELLISERVSGRRARDNLLEKSKKKDLKETERFAVSNYVKEVKIFNVSSSSDLGEIESDVRESESFKDIFSNEVQENERGGDRYSNGLEEKDKYKGRSNKLLLGRTSFSDNYQKSLQQLDSSSSKSNRSSHNSKSFEDFRSRKHLVIEQSASEPALDEVAIQAMVSILSGYVRRFQKDKDFRESLRQNCLSCLVTTDSEEGHHTDSKVIANLEQAMETVERVAEESGNAKELKKASLQLSVITGLNSKDLNDGFTSGIPNSQLSACAHLYLAVIYKLQKKDRVSAKHVLQVFSDSPSKARTSLLPELWDNLFLPHLSDLRVWYDQEAKSIPETSSRPRKLKLLEKVYNEILDSGTCQFAVYYKDWLTEGVEAPAIPTIQIPSMSVQGVLHGGSHGHSPELASPIGSVSSQPMISKKLYDAVFGGPNKLDGVDEVEVGEEEENFDNCMGSFEGTSEEDKRIVTYSPDRGRYTGQLIQEDTIESTEADATHHVERGRYTGQLIQEDTTESTAADAAHLANGLLPTAEEGWRLHTVNVPREEELKNEVENIHMWRTTPGSNLMLHALPHTKANELALKKLAESVFQLPQAEDPINLTTAIPISHPEDMPMHDSHTNLSNISSYVEGKYVNYEYFEEGSFFSNIPKNFICPLTGELFEDPVTLETGQTFERTAIKEWFDKGNRTCPMTRRRLECLAVPITNFVLKSVIDCWKSEHCRNLLALASQIAGSSSERGFKSKDERAVFVLEQLLIGFKTEERLMNAKHLISLGGLQFLIRRFELGKLEEKSRVVALLSCCIEADGGCRNYLSKNIKKAYLLELLHNKQVKSRENVVMLLTELICLKRRTEITSFLSSLQKEGIMNTMHVLLVYLQSSPPEQRPLVAVLLLHFDLLVESRKYSIYREEAVDSITVALDGSLNDEKIRAQCCRALLILGGKFSFSGELLTENWLLRQAGFFDGCETNFLDNVEESLQIDETIQWEEDEKAREDWWKNLAASLLGNGKKSFLEIISKCLCSGNMNLVRVCLVTVAWLSEALTLLSDAEFQLSAFASLIPQLKENLENGERVEHRVLACMSLHNFSKISECRVLLMTIAEEILVPLRSLAEVTWTAKHLHAIISGEDL* 1187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl11g01557 1186 Coils Coil 279 302 - -
Eupl11g01557 1186 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 709 784 IPR013083 -
Eupl11g01557 1186 ProSiteProfiles U-box domain profile. 709 784 IPR003613 GO:0004842|GO:0016567
Eupl11g01557 1186 CDD RING-Ubox_PUB 711 759 IPR045210 -
Eupl11g01557 1186 SUPERFAMILY ARM repeat 828 1152 IPR016024 -
Eupl11g01557 1186 MobiDBLite consensus disorder prediction 137 161 - -
Eupl11g01557 1186 Pfam U-box domain 710 781 IPR003613 GO:0004842|GO:0016567
Eupl11g01557 1186 SUPERFAMILY RING/U-box 701 782 - -
Eupl11g01557 1186 MobiDBLite consensus disorder prediction 185 206 - -
Eupl11g01557 1186 SMART Ubox_2 713 777 IPR003613 GO:0004842|GO:0016567
Eupl11g01557 1186 PANTHER OS04G0584500 PROTEIN 1 1184 - -
Eupl11g01557 1186 MobiDBLite consensus disorder prediction 185 200 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl11g01557 Eupl-Chr11 26970441 26980335 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl11g01557 710 824 U-box Gene Family AT1G23030 41.739 4.98e-18 87.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl11g01557 - - msin:131236977 1253.04