Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl11g01492 ATGGAGTGCACTAAGAGCCCAAAACCTCATGGAACAGAGATTTCTCATCAAGAAGATGGAGTGAAAAGAACTTCTAAGCTTCCCAAAAGAAGCAACAGTAATGGAAGAAGGTTTCTTGGAGTAAGGCAAAGGCCCTCAGGAAGATGGGTTGCTGAAATTAAGGACTCCTCACAGAAGTTGAGGCTTTGGTTAGGAACTTTTGATAGAGCAGAAGAAGCTGCCATGGCTTACGACAACGCAGCTAGGCTTTTAAGAGGAAGAAATGCAAAGACAAACTTTCCATATCATGAAAAAATCCATGAAGGGAATTGCAGCTTAGTTGGAAAAAATCCGAGGTTCTATCAGCTTCTTCGGCACACGATCATGAAGAACCATGCGAAGTCGTCCGCCGTCAACACCGAAGATCAAAGGAATAATTATGAGAAGAGAGGAAGTGAATCAGGTTTGATCGAATGCAGTTCGCTTGTCGAAGAAACTATAGTTTGTTCATCGAATTTAGATGATGGATTCTCGTTTGGTAGTTGTAAGGTTTATTCTTCTGTTATTGTAGCTCCTTCTTTTAGTGCTTCTTTGTATCAAAGGGAGGAAGAAGAAGAAGAAGAAGAAACGAAATATGAAGAGACTCAATCACTTGATCAACCTCTCTTTCTTCATGCAAATGGGTTATTGGAGAGTGGATTTATGTGA 687 0.4061 MECTKSPKPHGTEISHQEDGVKRTSKLPKRSNSNGRRFLGVRQRPSGRWVAEIKDSSQKLRLWLGTFDRAEEAAMAYDNAARLLRGRNAKTNFPYHEKIHEGNCSLVGKNPRFYQLLRHTIMKNHAKSSAVNTEDQRNNYEKRGSESGLIECSSLVEETIVCSSNLDDGFSFGSCKVYSSVIVAPSFSASLYQREEEEEEEETKYEETQSLDQPLFLHANGLLESGFM* 229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl11g01492 228 SMART rav1_2 37 100 IPR001471 GO:0003700|GO:0006355
Eupl11g01492 228 MobiDBLite consensus disorder prediction 1 26 - -
Eupl11g01492 228 Coils Coil 123 143 - -
Eupl11g01492 228 Gene3D AP2/ERF domain 36 95 IPR036955 GO:0003700|GO:0006355
Eupl11g01492 228 FunFam ethylene-responsive transcription factor RAP2-11 36 95 - -
Eupl11g01492 228 ProSiteProfiles AP2/ERF domain profile. 37 94 IPR001471 GO:0003700|GO:0006355
Eupl11g01492 228 Pfam AP2 domain 40 86 IPR001471 GO:0003700|GO:0006355
Eupl11g01492 228 SUPERFAMILY DNA-binding domain 38 95 IPR016177 GO:0003677
Eupl11g01492 228 MobiDBLite consensus disorder prediction 1 39 - -
Eupl11g01492 228 PRINTS Ethylene responsive element binding protein signature 60 76 IPR001471 GO:0003700|GO:0006355
Eupl11g01492 228 PRINTS Ethylene responsive element binding protein signature 38 49 IPR001471 GO:0003700|GO:0006355
Eupl11g01492 228 PANTHER SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR 8 140 - -
Eupl11g01492 228 CDD AP2 37 96 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl11g01492 Eupl-Chr11 24351127 24351813 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl11g01492 26 96 AP2-EREBP Transcription Factor Family AT5G19790 64.789 7.09e-27 102
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-ERF Eupl11g01492 AP2 1.5e-11 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl11g01492 K09286 - nnu:104600784 255.758