Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl11g01486 ATGGCGTCTGCAACACCTTCACCAAATTCTTCTCCATCTGCAGTTCCACCAGCTTCTAGTACTAGTACACCCCCGCCACCTTCAATTTCCTCCCCTCCTCCTTCAGCAAGTTCACCACCTCCTACACGGCCTCAGCCCAATGCGACTTCCGATCCGCCCGCACCTGCAACCCCTTCTACTCCTTCAACTCCACCACCTCAATCCTCTCCTCCCCCCGTTCCTGCCGCTCCTCCTCCGGTCGCTTTATCACCCCCACCAACACCACCACCTCTTCCCGCTTCAACACCACCAACTCCTCCCCCTGCACTCCCACCGCCACCGTCTCCTCCTAGTGCCCCTCCTCCGGAAGTGCCTTCACCACCTCCTCCAACATTATCACCCCCACCACCTGCCACTGAAGGTTCCCCTCCCCCAGCTACCCCAGTGTCTCCTGCATCATCACCACCTCCACCTCCTCAAGCAGTCTCGCCTTCTCCACCTCCACCTGTTGTCACTCCTCCTGCTAATGTTCCAACCCCATTGCCCTCCAATCCGCCTCCACCACCATCGGCAAAGCCACCCAAAAATTCACCTCCACCTCCTGTTCCATCTGCTTCTCAACCAGCATCTCCACCCTCACCAAATCCACCTCCTGGATCATCGCCACCACCCAGAAATCAACCACTTCCCATGCCACCTTCTCCTTCACCCCCATCTCCTCCCACTCCTCCGAGTAATTCATCTGCTGGTGGAACTCCTTTAATTCCAGTTCCACCCTCTCCTGCATTTCCATCAGGGGATCCAAATCCTAGTCCAGGTGTACCAGGAAATGTTAACTCCTCAGGTAGTGGGGGGATTAAGACTGGAGGCGCAGTAGCAATTGGTGTTGTTGTAGGCTTCATAGTGCTTAGTCTCATTGGAATGGCTGTGTGGTGTGTGAGGAAACAAAAGAAAAAGGTGGCTGGATATAATGGTGGCTATGTCATGCCTTCCCCATTTGGCTCTTCTCCGAAGTCGGATTCGTCCTTTATAAAGACGCATTCTTCAGCTCCTCTCGTAGGAAGTGCCTCTGGCAGTGATTTTATCTATTCACCATCAGAGCCAGGTGGGATAGGCAATTCAAGATCGTGGTTCACCTACGAAGAGCTAGTGGAGGTCACAAATGGGTTTTCTGCCCAGAATCTATTGGGTGAAGGTGGATTTGGCTGTGTGTACAAAGGATGCCTGACAGATGGAAGAGAGGTGGCTGTAAAACAGCTCAAGATTGGTGGTTCACAGGGGGAGCGTGAGTTCAGAGCTGAAGTCGAGACTATAAGCCGCGTACACCATCGCCATTTGGTTTCACTAGTGGGGTACTGCATTTCTGAGCATCAAAGGTTGCTTGTCTACGATTATGTCCCGAACAATACCCTTGATTACCATCTTCACGCGGAAGGTAGGCCTGTTATGGATTGGGCAACCCGGGTTAGGGTGGCTGCTGGTGCATCCCGTGGAATAGCTTACCTGCATGAAGACTGCCATCCTCGGATTATTCACAGGGATATTAAGTCATCAAACATTCTTTTAGACAACAACTTTGAAGCTCGGGTTTCAGATTTTGGGCTCGCAAGGTTAGCCCTGGATGCATACACACATGTAACCACACGTGTGATGGGAACCTTTGGATACATGGCTCCAGAGTATGCATCGAGTGGCAAGTTGACTGAAAAATCTGACGTATACTCTTTCGGAGTTGTACTTTTAGAGCTAGTTACCGGTCGCAAGCCCGTGGATGCATCTCAACCCTTGGGAGATGAGAGTCTGGTTGAATGGGCTCGACCATTGCTTAGTCATGCACTTGATAGTCAAGAATTTGAAGAGTTGGTAGATCCAAGGCTCGAAAAGAACTATGTAGTAGGTGAGATGTTCCGGATGATTGAGGCAGCTGCAGCATGTGTGCGTCATTCAGCTATGAAGAGACCTCGTATGGGACAGGTGGTGAGAGCCTTTGACGGTGTAGGTGACTCCTCTGATCTAACCAATGGGATGAGACCAGGCCAAAGCGAAGTTTTTGATTCCGCACAACAATCCGCAGAAATCAGAATGTTTCAGAGGATGGCTTTTGGTAGTCAAGACTACAGTATAGATTTTCCCAGTCAAAATAGCTGGAGGAGTTGA 2136 0.5103 MASATPSPNSSPSAVPPASSTSTPPPPSISSPPPSASSPPPTRPQPNATSDPPAPATPSTPSTPPPQSSPPPVPAAPPPVALSPPPTPPPLPASTPPTPPPALPPPPSPPSAPPPEVPSPPPPTLSPPPPATEGSPPPATPVSPASSPPPPPQAVSPSPPPPVVTPPANVPTPLPSNPPPPPSAKPPKNSPPPPVPSASQPASPPSPNPPPGSSPPPRNQPLPMPPSPSPPSPPTPPSNSSAGGTPLIPVPPSPAFPSGDPNPSPGVPGNVNSSGSGGIKTGGAVAIGVVVGFIVLSLIGMAVWCVRKQKKKVAGYNGGYVMPSPFGSSPKSDSSFIKTHSSAPLVGSASGSDFIYSPSEPGGIGNSRSWFTYEELVEVTNGFSAQNLLGEGGFGCVYKGCLTDGREVAVKQLKIGGSQGEREFRAEVETISRVHHRHLVSLVGYCISEHQRLLVYDYVPNNTLDYHLHAEGRPVMDWATRVRVAAGASRGIAYLHEDCHPRIIHRDIKSSNILLDNNFEARVSDFGLARLALDAYTHVTTRVMGTFGYMAPEYASSGKLTEKSDVYSFGVVLLELVTGRKPVDASQPLGDESLVEWARPLLSHALDSQEFEELVDPRLEKNYVVGEMFRMIEAAAACVRHSAMKRPRMGQVVRAFDGVGDSSDLTNGMRPGQSEVFDSAQQSAEIRMFQRMAFGSQDYSIDFPSQNSWRS* 712
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl11g01486 711 MobiDBLite consensus disorder prediction 247 264 - -
Eupl11g01486 711 Gene3D Phosphorylase Kinase; domain 1 362 458 - -
Eupl11g01486 711 MobiDBLite consensus disorder prediction 1 274 - -
Eupl11g01486 711 ProSitePatterns Protein kinases ATP-binding region signature. 389 411 IPR017441 GO:0005524
Eupl11g01486 711 FunFam Proline-rich receptor-like protein kinase PERK8 356 458 - -
Eupl11g01486 711 Gene3D Transferase(Phosphotransferase) domain 1 459 674 - -
Eupl11g01486 711 ProSitePatterns Serine/Threonine protein kinases active-site signature. 503 515 IPR008271 GO:0004672|GO:0006468
Eupl11g01486 711 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 292 692 IPR047117 -
Eupl11g01486 711 CDD STKc_IRAK 389 654 - -
Eupl11g01486 711 ProSiteProfiles Protein kinase domain profile. 383 644 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl11g01486 711 SUPERFAMILY Protein kinase-like (PK-like) 364 654 IPR011009 -
Eupl11g01486 711 Pfam Protein tyrosine and serine/threonine kinase 386 654 IPR001245 GO:0004672|GO:0006468
Eupl11g01486 711 MobiDBLite consensus disorder prediction 10 240 - -
Eupl11g01486 711 SMART serkin_6 383 632 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl11g01486 711 FunFam proline-rich receptor-like protein kinase PERK8 459 671 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl11g01486 Eupl-Chr11 24191716 24208934 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl11g01486 118 710 Trihelix Transcription Factor Family AT1G70460 49.442 4.89e-179 526
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-1 Eupl11g01486 PK_Tyr_Ser-Thr 7.8e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl11g01486 - - nnu:104603097 744.191