Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl11g01483 ATGAGTGGTGGTAATAGAAGAAAGAAGCTGCATTTTAGCAAGATCTATTCCTTCTCTCGTGGGAAACCGTCGATCCAGGACGAACACTCGCAGATTGGCGGACCAGGCTTCTCAAGGCTAGTCTTCTGCAATGAACCAGAATGCTACGAAGCCGGAGTCCTCAAGTATGAGGGAAATTATGTTAAAACTACAAAGTACACGCTTGTGACATTCTTCCCCAAAAACTTGTTTGAGCAGTTCAGGAGGGTTGCCAACATATACTTCCTCATTTCATGTTTCTTGTCCTTCACACCCCTTTCTCCTTTCTCAGCTGCCAGCTCTGTTGCCCCTCTTATCGTTGTGATCGGAGCAACCATGATCAAAGAGGGCGTGGAAGATTGGAGGCGGAAAAGGCAGGATATCCAGGTGAACAATCGAAAGGTTAAAGTGCACTGTGGTGATGGCATTTTTTACTACACCGAATGGAAGAATCTGAGAGTTGGAGATATAGTAAAGGTGGAGAAGGATGAGTTCTTTCCAGCTGACCTCCTCTTGCTTTCATCCAGTTACGAAGATGCCATATGCTATGTTGAGACCATGAACCTTGACGGAGAGACTAATTTGAAACTGAAACAAGCACTGGAGGTGACTTCTGGCTTACATGAGGACTCTAGTTTCCGGGATTTCAAGGTTTTGGTTAAATGTGAAGATCCGAATGCAAACCTTTACACTTTTGTTGGCAGTATGGATTTTGAAGAGCAACAGTACTCCCTTACACCTCAGCACCTTCTCCTTAGGGACTCAAAGCTCCGGAATACAGACTACATCTATGGGGCTGTTATTTTTACAGGCCACGACACAAAAGTTATTCAAAATTCAACAGATGCACCATCCAAGAGGAGCAAAATCGAGAGGAAGATGGATAAAATTGTCTACTTCTTGTTTTGTATTTTGTTTCTGATATCTTTTGTTGGATCGATATTCTTTGGCATTGCAACTAGGGAGGACCTAGAAAATGGCAGGATGAAACGATGGTATCTTAGACCAGATGACACCACAATTTTCTTTGACCCCAAAAGAGCAACCATCGCCGCAATTCTGCATTTTCTTACGGCTCTGATGTTGTACAGCTACTTGATCCCCATCTCCTTGTATGTATCCATAGAACTTGTCAAAGTTGTGCAGAGCATCTTCATCAACCAAGACCTGCACATGTACTACGAGGAAACTGACAAGCCTGCACGTGCCCGCACTTCAAACTTGAATGAGGAACTTGGCCAAGTTGACACGATACTTTCTGATAAGACAGGAACTCTGACCTGCAATTCCATGGAATTCCTCAAGTGTTCTGTGGCTGGGATAGCTTATGGCCGTGGTGTGACGGAGGTCGAGAGGGCAATGGCTAGAAGAAAAGGATCACCATTGGTTCATGAGGTGGTAGATGATGGAGACCTTGTCCAGAATCCTACGGATACAAAATCATCCATTAAAGGCTTTAATTTTAAGGATGAAAGGATCGTGGATGGAAATTGGGTTAATGAGCCTCACTCAGATGTCATTCAAAAGTTCCTTCGCTTATTGGCTATCTGCCATACGGCCATACCTGAAGTGGATGAAGAAACGGGGAAGATTTCGTACGAAGCAGAATCGCCAGATGAGGCAGCTTTTGTGATTGCAGCAAGAGAACTTGGCTTTGAATTTTACAAGAGGACACAAACAAGCATCTCACTGCATGAGTTGGATCCTGTGTCCGGAAAGAAATTTGAAAGGTCATATAAGCTTTTAAATATCTTAGAGTTTAATAGCTCAAGAAAGCGGATGTCTGTCATAGTAAGAAACGAGGAGGGCAAGCTATTACTACTTTGTAAAGGTGCTGACAGCGTCATGTTTGAAAGGCTTGCAAAGAACGGGAGGGACTTTGAAGAGGAGACTAAGGACCATGTGAACGAGTATGCTGATGCAGGCTTGAGAACCTTGATACTGGCACATCGTGAACTGGGTGAGGAAGAATACAAAGATTTTAATGATGAATTCACCGAGGCCAAGAACTCGGTCAGTGCAGAACGGGATGCCATGGTAGATGAGGTAGCAGAGAAGATAGAGAGGGATTTGATTCTTCTCGGTGCCACTGCTGTTGAGGACAAACTCCAAAATGGGGTTCCCGAATGCATTGACAAGCTTGCGCAAGCTGGAATGAAGATATGGGTTTTGACTGGAGATAAGATGGAGACTGCCATCAATATTGGTTTTGCATGTAGTTTGCTTAGACAAGGAATGAAGCAGATAATTATCAACTTGGAGACACCAGAAACTAAAGCACTGGAGAAAGCTGGGGACGAATCCGCAATCAGGAAGGCATCGAAGGCGAGCATCATCCATCAGATAAGTGAGGGGATGGCACAGCTTACTGCATCGAATGGAAGCTCTGATGCATTTGCCTTGATCATTGATGGGAAGTCGCTTGTTTATGCCCTAGAGGATGATATCGAGAACATGTTTCTAGAGTTAGCAATTGGTTGTGCATCAGTTATTTGCTGTCGTTCATCACCAAAACAGAAAGCACTAGTTACAAGATTGGTTAAAACTGGAACCGGTAAGACAACATTAGCAATTGGTGATGGAGCCAATGATGTGGGAATGCTTCAAGAAGCAGATATTGGAGTTGGCATCAGCGGTGTTGAAGGAATGCAGGCAGTAATGGCAAGTGACATTTCGATTGCTCAGTTCCAATTTTTGGAGCGTTTGCTACTTGTGCACGGACATTGGTGTTACAGGAGAATCTCATCAATGATATGCTACTACTTCTACAAGAATATTACATTCGGTTTTACTCTCTTCCTGTTCGAGGCGCATGCTTCTTTTTCTGGACAAGCTGCATATAATGATTGGTATATCTCCCTCTATAATATCTTCTTCACGACATTTCCGGCTATTGCTCTTGGGGTGTTTGATCAAGATGTCTCTGCACGCTTTTGTCTCAAGTTCCCCCTACTGTACCAAGAAGGTGTGCAGAATGTCCTCTTCAGCTGGCGTCGGATACTTGGCTGGATGCTCAATGGTGTTTGCAGTGGCATCATCATCTTCTTCTTCTGCACAAGTGCATTGGGGCACCAGGCCTTCCGTAAGGGCGGGGAGGTTGTTGGTTTGGAGATTCTGGGGACGACCATGTACACATGCATTGTTTGGGTCGTGAACTGCCAGTTGGCACTCTCTGTCAGTTACTTCACTCTGATACAGCATCTCTGTATCTGGGGTGGCGTCATCCTGTGGTATCTGTTCCTTTTGGCCTATGGAGCCATGTCTCCCACCATATCCACAACTGCCTACAAGGTCTTCATCGAAGCATGTGCCCCGGCCCCTGCTTATTGGCTCGTCACACTCTTCGTGGTAATCTCCACCCTCACCCCATACTTCTTGTTCTCAGCCATCAGAATGCGATTCTTCCCCATGTATCATGGGATGATACAGTGGATAAGACTGGAGGGGAAATCCAATGACCCTGAGTATTGCCAGATGGTGCGGCAGAGATCCATTCGGTCCACAACAGTAGGTTCTACAGCACGGTTGGAAGCGAAAGCTAATAGCTTAAAAGAGCAGCTTCATTGA 3585 0.4499 MSGGNRRKKLHFSKIYSFSRGKPSIQDEHSQIGGPGFSRLVFCNEPECYEAGVLKYEGNYVKTTKYTLVTFFPKNLFEQFRRVANIYFLISCFLSFTPLSPFSAASSVAPLIVVIGATMIKEGVEDWRRKRQDIQVNNRKVKVHCGDGIFYYTEWKNLRVGDIVKVEKDEFFPADLLLLSSSYEDAICYVETMNLDGETNLKLKQALEVTSGLHEDSSFRDFKVLVKCEDPNANLYTFVGSMDFEEQQYSLTPQHLLLRDSKLRNTDYIYGAVIFTGHDTKVIQNSTDAPSKRSKIERKMDKIVYFLFCILFLISFVGSIFFGIATREDLENGRMKRWYLRPDDTTIFFDPKRATIAAILHFLTALMLYSYLIPISLYVSIELVKVVQSIFINQDLHMYYEETDKPARARTSNLNEELGQVDTILSDKTGTLTCNSMEFLKCSVAGIAYGRGVTEVERAMARRKGSPLVHEVVDDGDLVQNPTDTKSSIKGFNFKDERIVDGNWVNEPHSDVIQKFLRLLAICHTAIPEVDEETGKISYEAESPDEAAFVIAARELGFEFYKRTQTSISLHELDPVSGKKFERSYKLLNILEFNSSRKRMSVIVRNEEGKLLLLCKGADSVMFERLAKNGRDFEEETKDHVNEYADAGLRTLILAHRELGEEEYKDFNDEFTEAKNSVSAERDAMVDEVAEKIERDLILLGATAVEDKLQNGVPECIDKLAQAGMKIWVLTGDKMETAINIGFACSLLRQGMKQIIINLETPETKALEKAGDESAIRKASKASIIHQISEGMAQLTASNGSSDAFALIIDGKSLVYALEDDIENMFLELAIGCASVICCRSSPKQKALVTRLVKTGTGKTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMASDISIAQFQFLERLLLVHGHWCYRRISSMICYYFYKNITFGFTLFLFEAHASFSGQAAYNDWYISLYNIFFTTFPAIALGVFDQDVSARFCLKFPLLYQEGVQNVLFSWRRILGWMLNGVCSGIIIFFFCTSALGHQAFRKGGEVVGLEILGTTMYTCIVWVVNCQLALSVSYFTLIQHLCIWGGVILWYLFLLAYGAMSPTISTTAYKVFIEACAPAPAYWLVTLFVVISTLTPYFLFSAIRMRFFPMYHGMIQWIRLEGKSNDPEYCQMVRQRSIRSTTVGSTARLEAKANSLKEQLH* 1195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl11g01483 1194 FunFam Phospholipid-transporting ATPase 700 904 - -
Eupl11g01483 1194 Pfam Cation transport ATPase (P-type) 536 626 - -
Eupl11g01483 1194 SUPERFAMILY HAD-like 420 919 IPR036412 -
Eupl11g01483 1194 Gene3D - 117 287 - -
Eupl11g01483 1194 SFLD p-type atpase 409 915 IPR044492 -
Eupl11g01483 1194 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 491 702 IPR023299 GO:0000166
Eupl11g01483 1194 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 31 1153 - -
Eupl11g01483 1194 FunFam Phospholipid-transporting ATPase 117 287 - -
Eupl11g01483 1194 PRINTS P-type cation-transporting ATPase superfamily signature 425 439 - -
Eupl11g01483 1194 PRINTS P-type cation-transporting ATPase superfamily signature 864 883 - -
Eupl11g01483 1194 SUPERFAMILY Calcium ATPase, transduction domain A 144 284 IPR008250 -
Eupl11g01483 1194 SUPERFAMILY Calcium ATPase, transmembrane domain M 55 1142 IPR023298 -
Eupl11g01483 1194 Pfam Phospholipid-translocating P-type ATPase C-terminal 892 1142 IPR032630 -
Eupl11g01483 1194 Gene3D - 701 904 IPR023214 -
Eupl11g01483 1194 Gene3D - 567 700 IPR023299 GO:0000166
Eupl11g01483 1194 ProSitePatterns E1-E2 ATPases phosphorylation site. 427 433 IPR018303 -
Eupl11g01483 1194 NCBIfam HAD-IC family P-type ATPase 830 943 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Eupl11g01483 1194 CDD P-type_ATPase_APLT_Dnf-like 58 1024 - -
Eupl11g01483 1194 FunFam Phospholipid-transporting ATPase 542 700 - -
Eupl11g01483 1194 NCBIfam phospholipid-translocating P-type ATPase 56 1149 IPR006539 GO:0000287|GO:0005524|GO:0015914|GO:0016020|GO:0140326
Eupl11g01483 1194 Pfam Phospholipid-translocating ATPase N-terminal 41 107 IPR032631 -
Eupl11g01483 1194 SFLD C1.7: P-type atpase like 409 915 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl11g01483 Eupl-Chr11 24095226 24124846 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl11g01483 1 1190 Primary Pumps ATPases AT1G68710 71.300 0.0 1855
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl11g01483 K01530 - nnu:104600847 2010.34