Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl11g01472 ATGATGCCCCCTGAGCAAGAGATCAAAATTACCGGCAAGTCGACTAATGTTCTCGTTGTTAACAGGTCGGAGAACATTTTGATACATGCTGAGCCACCAGGTTCTGCGAGTAATGTGAACCCGTGTTCGGAGGATCGGTTGCCTGAGCAACCTCTAGCAACCACAAATCGATGTTCAATACTACGTGAATCGTCGTACCCTGTTACACTCAAGTTTGAAGATGTGGCATACAGTATAAAGCTGCGTAACACCGACCGTAATGTCGTTAATGGTGTTACTGGGATTGTCCTACCGGGTGAGATTCTAGCGATGCTTGGTCCATCGGGCAGCGGCAAAACGACGCTTCTGACTGCTCTTGCGGGTAGGCTGCCTGGAAAAGTTTCGGGCAGCATAACCTACAATGGCCAGCCCTTCTCCAGCTCCATAAAACGCAAGACTGGTTTTGTTACACAAGATGACGTGCTCTACCCTCATCTCACTGTACTTGAGACGCTAACTTACACAGCTACGTTAAGGCTACCCAGCAAATTAACTAGAGAAGAGAAAGTTGAGCAAGTCGAATTGGTCATCGTGGAACTTGGTTTAACTAGATGTCGGAATAGTGTAGTGGGTGGCACCCTCTTGCGCGGTGTGTCGGGTGGTGAGCGCAAGCGGGTGAGTATCGGACAGGAGATGTTAGTGAACCCGAGTCTTTTGTTGCTAGACGAGCCAACATCAGGGCTCGACTCGACCACGGCGCAACGTATTGTGGCAACACTGCAAGGGCTAGCAAGAGGTGGCAGGACAGTGGTGACAACGATACATCAGCCATCAAGTCAGTTGTATGGGTTGTTTGATAAAGTGGTGGTGTTATCGGAGGGATACCCGATATATAGCGGTAGTGCGGTCCAGGCCATGGAGTATTTCGGTTCTATCGGCTACATGCCCCGGTTTAATCTCATTAACCCAGCTGATTTTCTCCTAGATCTTGCTAATGGTGTGGTGCATGATATGAAGCAAGGTGATGAACAAGACCATCATGGTCGATCAAAGAACGACGACGAAAATTCAACGAAACAGTTTCTAATATCGTCGTACAAAAAGAATCTACAGGGCGTCTTGAAGGCGGAAATTCACCAAAATTGTAGAAACCCGGATTCTTCGGTATTAGGAACAACATCTTGCAGGAGTTCTGAGAAGCAATGGAGCACGAGCTGGTGGGAGCAATTCAATGTTTTGTTGAAGAGGGGTTTAAAAGAAAGGAAACATGAATCCTTTTCCAGGTTGAGGATTTTCCAGGTCGTTTCGGTTTCCATTCTTTCAGGTCTACTGTGGTGGCACTCTGATCCCTCACACATACAAGATCAGGTCGGCCTACTCTTCTTCTTCTCCATATTTTGGGGCTTCTTTCCCTTATACAATGCCATATTCACATTCCCACAAGAGCGGCCCATGCTAATCAAGGAGCTTTCCTCAGGAATGTACCGTCTCTCGTCCTACTACTTCGCGCGAATGGTTGGGGACTTACCGATGGAGCTCATACTCCCGACCATCTTTGTGTCTATCACGTATTGGATGGGCGGTCTCAAGCCTTCACCTATCAACTTTGTACTAACCCTCTTCATCATCCTCTACAATGTGCTAGTCTCTCAAGGACTAGGCTTAGCCCTTGGAGCAATCTTGATGGATGTGAAACAGGCAACGACCCTAGCTTCTGTTACCATGCTTGTTATCCTACTAGCCAGTGGATACTACATTCAACACATTCCATCTTTCATAGCTTGGCTGAAGTACATTTCCTTTAGTCACTACTGTTACAAGCTTCTAGTGGGAATGCAATACGCAGTCGACGACTACTACGAATGCGGGTACGGAGGCCATTGCAAGGTTTCAGAATACCCTGCCATAAAACATCTAGGTCTCAATAACATGGGATGGGATGTATTTGCCTTGACCCTCATGTTTGTAGGTTATAGGCTTATAGCTTATGTAGCCTTGAGGGCTGGGCAGCCTCATTGA 1998 0.472 MMPPEQEIKITGKSTNVLVVNRSENILIHAEPPGSASNVNPCSEDRLPEQPLATTNRCSILRESSYPVTLKFEDVAYSIKLRNTDRNVVNGVTGIVLPGEILAMLGPSGSGKTTLLTALAGRLPGKVSGSITYNGQPFSSSIKRKTGFVTQDDVLYPHLTVLETLTYTATLRLPSKLTREEKVEQVELVIVELGLTRCRNSVVGGTLLRGVSGGERKRVSIGQEMLVNPSLLLLDEPTSGLDSTTAQRIVATLQGLARGGRTVVTTIHQPSSQLYGLFDKVVVLSEGYPIYSGSAVQAMEYFGSIGYMPRFNLINPADFLLDLANGVVHDMKQGDEQDHHGRSKNDDENSTKQFLISSYKKNLQGVLKAEIHQNCRNPDSSVLGTTSCRSSEKQWSTSWWEQFNVLLKRGLKERKHESFSRLRIFQVVSVSILSGLLWWHSDPSHIQDQVGLLFFFSIFWGFFPLYNAIFTFPQERPMLIKELSSGMYRLSSYYFARMVGDLPMELILPTIFVSITYWMGGLKPSPINFVLTLFIILYNVLVSQGLGLALGAILMDVKQATTLASVTMLVILLASGYYIQHIPSFIAWLKYISFSHYCYKLLVGMQYAVDDYYECGYGGHCKVSEYPAIKHLGLNNMGWDVFALTLMFVGYRLIAYVALRAGQPH* 666
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl11g01472 665 Pfam ABC-2 type transporter 401 606 IPR013525 GO:0016020|GO:0140359
Eupl11g01472 665 ProSitePatterns ABC transporters family signature. 211 225 IPR017871 GO:0005524|GO:0016887
Eupl11g01472 665 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 70 306 IPR027417 -
Eupl11g01472 665 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 53 656 - -
Eupl11g01472 665 SMART AAA_5 98 289 IPR003593 GO:0016887
Eupl11g01472 665 FunFam ABC transporter G family member 22 77 305 - -
Eupl11g01472 665 Gene3D - 68 377 IPR027417 -
Eupl11g01472 665 Pfam ABC-2 type transporter 268 333 IPR043926 GO:0140359
Eupl11g01472 665 CDD ABCG_EPDR 67 293 - -
Eupl11g01472 665 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 70 311 IPR003439 GO:0005524
Eupl11g01472 665 Pfam ABC transporter 91 239 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl11g01472 Eupl-Chr11 23805702 23809650 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl11g01472 68 287 Calmodulin-binding Proteins AT2G36910 28.571 1.37e-12 69.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl11g01472 K05681 - pvy:116132157 1023.85