Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl11g01470 ATGGAACCAATGGACATCGTCGGGAAGTCAAAAGAGGACGTTTCGCTACCAAAAGCAACTATGTTTAAGATCATTAAGGAGATGCTGCCGCCAGATGTTCGTGTTGCAAGAGACGCTCAAGATCTTCTTGTCGAGTGTTGTGTAGAGTTTATCAACCTCATTTCTTCTGAGTCCAACGAAGTATGTGGCCGAGAGGAAAGAAGGACAATTGCACCTGAGCATGTTCTCAAAGCTCTAGAGGTTCTTGGGTTTGGGGAGTACATCGACGAGGTTTGTGCTGCATATGAACAACATAAGCTTGAGACTCTGGACTCGCCAAAAGCCGGCAAGTGGAGCAGTGGAGCCGAGATGACTGAGGAAGAAGCATTAGCAGAGCAACAGAGGATGTTTGCAGAAGCACGTGCAAGAATGAATGGCGGGGTGAACATCCCCAAGCAATCAGACTCAGACCGGAGCTTAGAGAGCTAA 468 0.4786 MEPMDIVGKSKEDVSLPKATMFKIIKEMLPPDVRVARDAQDLLVECCVEFINLISSESNEVCGREERRTIAPEHVLKALEVLGFGEYIDEVCAAYEQHKLETLDSPKAGKWSSGAEMTEEEALAEQQRMFAEARARMNGGVNIPKQSDSDRSLES* 156
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl11g01470 155 PANTHER PROTEIN DR1 HOMOLOG 1 154 IPR044255 -
Eupl11g01470 155 MobiDBLite consensus disorder prediction 136 155 - -
Eupl11g01470 155 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 15 79 IPR003958 -
Eupl11g01470 155 SUPERFAMILY Histone-fold 12 140 IPR009072 GO:0046982
Eupl11g01470 155 Gene3D Histone, subunit A 4 141 IPR009072 GO:0046982
Eupl11g01470 155 FunFam Negative cofactor 2 beta 6 142 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl11g01470 Eupl-Chr11 23643659 23665097 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl11g01470 1 145 CCAAT-DR1 Transcription Factor Family AT5G23090 80.822 1.21e-87 251
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YB Eupl11g01470 CBFD_NFYB_HMF 4.1e-21 CL0012
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl11g01470 K21751 - atr:18431723 293.893