Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl11g01444 ATGGACGCGCGTCGAGCTTCGAGAATGGTGATCGACCCCAAGGTGCGGCAAGTCGGTTTCTTCACCCCTGGTCCGCCCCCCGAACGGATGCAGTCCGTCCCGGTCGAGTCCACCTCGCCTCCGGTCTCCGATATGTCACCGGCAGGGAATTCTCTTTCTCCTGTCATGATCCCTCCTCCTCGGCATGCCTCTGATAACCTCTCTTCTCAGGCTTTTCAGTCTCGTGCCATGCTTGTTCCCGTCCCCATGTCGCCTCTCCGAAGGTCTTCGATTGGAGATAACATGCCGCTTGGGAGCTACAACCCTTCGGAGTTGCTTTCGGGGACGTCCCCATTGCCATCGCCTTCGAATAGGTTCGATGATGGAGAGTTCTCGGAGGATATGTCCTCCACGGGTCGGTTCCGCAGGAGCAATTCTGGAAAAGTAGCCTCGTCTTTTCCGAGTGGTGGATTTGATACGACAGCAATGAGATCGAGTAATTTTCCATCTCCGAGCAATCTGACAACAGTTTCGGTGGTGAAAATGCCGCCCGGCGTGTCTGAAAAAGGTGGAGGATTGGTAGAAGTGCAAAATGAACGACTGCCAAGTTCAAAGCCATTGAAAGAGAAAACCTCGAAGGCTGAAAGGCGTGCCCTTCAGGAGTCTCAGCGAGCTGCAAAAGCTGCTGCTAAAGCTGAAGGAAGTAAGGCTACTGCTGCTTCTGGAGGAGCAGCTCCAGTGAATGCAAAACCAGCTAAAGCAGCTGTGAAGCCCCCTTCACAAAAGAAAGACAATGCTCAAGTTCCAGCTTCTGTGGCAGCTTCTGAGAAAAAGGGAAGTGATCGCCCTCCAGAAAAAGATAGGAAGAAAGATGTTCCTCCTCCACGCATGCAATTTGATGATAAGCAACGGGTTGAAAAGGCTAAAAGACGTGCTGTAGTCAAACAAACTGAAGCTAGAAACAGAGTTGAATTGTTTAGACATTTGCCTCAGTATGAACATGGAACTCAGCTTCCTGATCTTGAGTCAAGGTTTTTCCAACTTGATCCAATGCATCCTGCTGTGTACAAGGTTGGGTTACGATATCTGGCAGGAGATATATCTGGTGGTAATGCTCGTTGTATTTCTATGCTTAATGCATTCAAAGAGGCCATTAAAGATTACTCCACACCACCAGAAAAGTCTCTTATTAGAGACTTAACTGCAAAAATCAGTAGTTATGTTTCTTTTCTGACTGAATGTAGGCCCCTTTCTATCAGCATGGGGAATGCAATTAAGTTTTTGAAGAATCGCATCACCGAATTACCTTTGACCCTTTCTGAGTCAGAAGCAAAAACAACTCTTCAGTCAGATATTGATCGTTTTATAAATGAGAAGATAATACTTGCAGATAAGGTGATTGTTGAGCACGCTGTTACAAAGATCAGGGATGGGGATGTGCTTCTCACATATGGGTCACCCTCTGTTGTTGAAATGATATTATTGTATGCTCATGAACTTGGGAAACAGTTCCGTGTTGTGGTAGTAGACTCACGTCCAAAGCTTGAAGGGCAAGCATTACTTCGTAGGTTGGTGGCAAAGGGCCTCAGCTGTACATATACCCATATCAATGCTATTTCTTATATCATGCATGAAGTCACAGGGGTTTTTCTAGGTGCTTCTTCGGTGTTATCTAATGGAACAGTTTACTCAAGGGTTGGGACTGCATGTGTGGCTATGGTTGCTCATGCATTTCGTGTTCCAGTCTTAATATGTTGTGAAGCGTATAAATTTCACGAAAGGGTACAGCTTGATTCGATTTGCTCTAATGAACTCGGTGATCCAGATGCTATTTCAAAGGTTCCTGGAAGAAAGGATGTAAATCATTTGGATAACTGGGCTAATAATGAAAATCTGCAACTTCTGAATCTTATTTATGATGCAACGCCTTCAGATTATGTCTCAATGATTGTCACAGATTATGGCATGGTAAGTCGCATTATGATTTCAAAGTTCCAACTTTTGAGTCTCTATTTTATCTGGAACAATGTCACAAAAGGTTATGAATTTCTTCATATTCTATTTTTTTTTGTTGCATAA 2058 0.4475 MDARRASRMVIDPKVRQVGFFTPGPPPERMQSVPVESTSPPVSDMSPAGNSLSPVMIPPPRHASDNLSSQAFQSRAMLVPVPMSPLRRSSIGDNMPLGSYNPSELLSGTSPLPSPSNRFDDGEFSEDMSSTGRFRRSNSGKVASSFPSGGFDTTAMRSSNFPSPSNLTTVSVVKMPPGVSEKGGGLVEVQNERLPSSKPLKEKTSKAERRALQESQRAAKAAAKAEGSKATAASGGAAPVNAKPAKAAVKPPSQKKDNAQVPASVAASEKKGSDRPPEKDRKKDVPPPRMQFDDKQRVEKAKRRAVVKQTEARNRVELFRHLPQYEHGTQLPDLESRFFQLDPMHPAVYKVGLRYLAGDISGGNARCISMLNAFKEAIKDYSTPPEKSLIRDLTAKISSYVSFLTECRPLSISMGNAIKFLKNRITELPLTLSESEAKTTLQSDIDRFINEKIILADKVIVEHAVTKIRDGDVLLTYGSPSVVEMILLYAHELGKQFRVVVVDSRPKLEGQALLRRLVAKGLSCTYTHINAISYIMHEVTGVFLGASSVLSNGTVYSRVGTACVAMVAHAFRVPVLICCEAYKFHERVQLDSICSNELGDPDAISKVPGRKDVNHLDNWANNENLQLLNLIYDATPSDYVSMIVTDYGMVSRIMISKFQLLSLYFIWNNVTKGYEFLHILFFFVA* 686
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl11g01444 685 MobiDBLite consensus disorder prediction 17 69 - -
Eupl11g01444 685 PANTHER TRANSLATION INITIATION FACTOR EIF-2B 45 651 - -
Eupl11g01444 685 MobiDBLite consensus disorder prediction 32 50 - -
Eupl11g01444 685 SUPERFAMILY NagB/RpiA/CoA transferase-like 316 651 IPR037171 -
Eupl11g01444 685 Gene3D - 456 658 IPR042529 -
Eupl11g01444 685 Pfam Initiation factor 2 subunit family 360 650 IPR000649 GO:0044237
Eupl11g01444 685 MobiDBLite consensus disorder prediction 94 116 - -
Eupl11g01444 685 MobiDBLite consensus disorder prediction 195 215 - -
Eupl11g01444 685 MobiDBLite consensus disorder prediction 131 173 - -
Eupl11g01444 685 MobiDBLite consensus disorder prediction 271 306 - -
Eupl11g01444 685 MobiDBLite consensus disorder prediction 87 306 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl11g01444 Eupl-Chr11 22845815 22859447 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl11g01444 1 650 Eukaryotic Initiation Factors Gene Family AT5G38640 65.961 0.0 796
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl11g01444 K03680 - nnu:104603062 1001.12