Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl11g01430 ATGTTCGACAGGACCTCTGTTAATGACGTTAATGTTAACCCTAAAGAGCAGCCTCACTCCTCGTTCTTCCAATTCTCTTCCGACTTTGACCACGCGGACGATGGCGTTTGGTTTTTTCAACACCAGAACGAGCTGCTTGTGGGTCAGTTTCCACAACAGCAGATCATGACGGTAGACACTTCAAGTGAGACTGTAGCTGATGCTGTGATTAACATGGAACATTCAAAGATGTTAAACGGAGACTCTGGTGGCCCTTCTAACTGTAAAGAAAGCTTTGATCAGACTGAGCAGATCCCTCGAAAGAGATCTGTAAAGAAAGATCGACACAGCAAGATTTATACTGCTCAAGGCCTGAGAGATCGGAGAATGAGACTATCCCTCGAAATTGCGCGAAAGTTCTTTACTCTCCAAGACATGCTCGGTTTCGATAAAGCCAGCAAAACCGTCGAATGGCTCCTGACAAAGTCCAAGGCTGCGATCAAGGAGCTCTCTAGAGGCCTTGATCGCACTGCCAAGAGTGTGTCATCTACATCGGAATGCGAAGTCTTATCTGGTGTTGATGAGACCCACATTAATGAAGCTCGGCAAGGTAAAGTCTCCAAAGGGAAATCCTCGGCAGGTATTCCCAAAGGTAAAAAGATTAGACAATCACGCAAATCTACATTTCATCCTCAGGCTAGAGTCTCCAGGGAAAAAGCAAGAGAAAGGGCAAGGGAGAGGACAATGGAAAAGATTTGGAGTAGAAGGTTCAACAAATCCAAACAATGTCCCGAAGCAAACCTCCATAGTCTGAACCAACAAATGGAAACAGGTGAAGAATCAGGTTCCCACAGCCACGACGTTAAGTCCTCCTTGGAGGTGGGGGCTGAGGATGAAGAACCCAGCTCTCACTCGCTCGAGTATCGAGGGCCCATCGAGAAAATTGTGGACGAACCTTTGATGATCACCTGCAAATCGAGCCCAGCTTCGATCTTCAATTATCACCACGACATTGAAATATCACAAGGGGTAAGTCCCAACAACAACAACAACAATTTTCCTAATTTTCCACAAAATTGGGACATCGATGGAGCTAGAACACACTCTAGCTATTGTGCCATGACAAACATGCATCTATCAACAGATAATGCCCAAGAGCGCATACCAACCTCATTTTTCTTGACCAGCTCCGATGCTCGTTTTCAGTCTCAATTTGCAGATATTCAGTTCTACAGCAAGCCATGGGAACCCTGCAACAATCAAAGTTTGTGCTAA 1254 0.4553 MFDRTSVNDVNVNPKEQPHSSFFQFSSDFDHADDGVWFFQHQNELLVGQFPQQQIMTVDTSSETVADAVINMEHSKMLNGDSGGPSNCKESFDQTEQIPRKRSVKKDRHSKIYTAQGLRDRRMRLSLEIARKFFTLQDMLGFDKASKTVEWLLTKSKAAIKELSRGLDRTAKSVSSTSECEVLSGVDETHINEARQGKVSKGKSSAGIPKGKKIRQSRKSTFHPQARVSREKARERARERTMEKIWSRRFNKSKQCPEANLHSLNQQMETGEESGSHSHDVKSSLEVGAEDEEPSSHSLEYRGPIEKIVDEPLMITCKSSPASIFNYHHDIEISQGVSPNNNNNNFPNFPQNWDIDGARTHSSYCAMTNMHLSTDNAQERIPTSFFLTSSDARFQSQFADIQFYSKPWEPCNNQSLC* 418
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl11g01430 417 ProSiteProfiles R domain profile. 227 244 IPR017888 -
Eupl11g01430 417 Pfam TCP family transcription factor 104 245 IPR017887 -
Eupl11g01430 417 MobiDBLite consensus disorder prediction 268 298 - -
Eupl11g01430 417 MobiDBLite consensus disorder prediction 273 298 - -
Eupl11g01430 417 MobiDBLite consensus disorder prediction 224 251 - -
Eupl11g01430 417 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 76 357 IPR005333 GO:0003700
Eupl11g01430 417 ProSiteProfiles TCP domain profile. 105 163 IPR017887 -
Eupl11g01430 417 MobiDBLite consensus disorder prediction 196 251 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl11g01430 Eupl-Chr11 22452157 22453791 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl11g01430 95 204 TCP Transcription Factor Family AT1G68800 54.955 2.14e-26 107
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Eupl11g01430 TCP 9e-45 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl11g01430 - - mof:131146473 317.39