Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl11g01415 ATGAAGGAGAGACAAAGGTGGCAACCTGAAGAAGACGCACTCCTCCGAGCCTACGTGAAGCAATATGGACCCAAAGAATGGAACCTCGTCTCTCAACGAATGGGCAGACCCTTGGACCGTGACGCCAAGTCCTGTCTCGAGCGCTGGAAAAACTACCTCAAACCCGGCATTAAGAAGGGCTCCTTGACCCTCGAAGAACAAAACCTCGTCATCTCTCTTCAAGCCAAGTACGGAAATAAGTGGAAGAAAATCGCCTCCCAAGTCCCCGGTCGCACCGCCAAACGCCTTGGCAAGTGGTGGGAAGTCTTCAAAGAGAAGCAACTCAAACTCAAGAACATACAAAATCGCCACCCAGACCACATTCCACCACCACCACCACCAACAACAACAACAGTTACTACTACTGCAGCAGCTGCTGCTGCTGCTGCTGCGGCGGCGACTGAAGAAGCTCTTCAAGGGAAATACGACCATATTTTAGAAACATTCGCGGAAAAATACGTTCAACCCAATGTTAGGCTCCAACCACCTATCCTCTCTCTTGGGTGCTCCATGATCACCGATGCTTCATCTTCTGCTTCATCTTCTCTTCTTCCGCCATGGATGATGAGTAGTACATCAACTTCATCCTTATCACCCTCTTCATCCGCGACACCTTCCCCATCTGTTAGTCTCTCGCTTTCACCTTCAGACCCACCATCATCAACTTTATCAGTTCATCAGATGGGTATGCTTATTCAGTACTGTAAGGAGTTGGAAGAAGGGAGACAGAACTGGTTGCATCATAAGAAGGAGGCAACATGGCGGTTAAGTCGGTTGGAGCAACAGTTGGAGTCGGAGAAGGCGAGGAAGAGGAGGGAGATGATGGAGGAGATGGAAGCGAAGATAAGGTGTTTGAGAGAAGAGGAGATGGGTTATGTTGATAGGATAGAGAGTGAGTGTAGAGAACAAATCAATGCGATACAGAGAGATGCAGAAGCGAAGGAAGCGAAGATGGTGGAGATGTGGGTTAGTAAACATGTTAAGCTTGGTAAGCTTGTGGAACAAATGGGGAATCGTCAACACTTCAATGTAACAAAGGAATTACAGTAA 1089 0.4803 MKERQRWQPEEDALLRAYVKQYGPKEWNLVSQRMGRPLDRDAKSCLERWKNYLKPGIKKGSLTLEEQNLVISLQAKYGNKWKKIASQVPGRTAKRLGKWWEVFKEKQLKLKNIQNRHPDHIPPPPPPTTTTVTTTAAAAAAAAAAATEEALQGKYDHILETFAEKYVQPNVRLQPPILSLGCSMITDASSSASSSLLPPWMMSSTSTSSLSPSSSATPSPSVSLSLSPSDPPSSTLSVHQMGMLIQYCKELEEGRQNWLHHKKEATWRLSRLEQQLESEKARKRREMMEEMEAKIRCLREEEMGYVDRIESECREQINAIQRDAEAKEAKMVEMWVSKHVKLGKLVEQMGNRQHFNVTKELQ* 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl11g01415 362 Pfam Myb-like DNA-binding domain 7 67 - -
Eupl11g01415 362 Coils Coil 310 330 - -
Eupl11g01415 362 PANTHER PROTEIN ROUGH SHEATH 2 HOMOLOG 1 356 - -
Eupl11g01415 362 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 58 108 IPR017930 -
Eupl11g01415 362 FunFam MYB-related transcription factor 4 58 - -
Eupl11g01415 362 CDD SANT 6 53 IPR001005 -
Eupl11g01415 362 ProSiteProfiles Myb-like domain profile. 1 53 IPR001005 -
Eupl11g01415 362 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 1 57 IPR017930 -
Eupl11g01415 362 ProSiteProfiles Myb-like domain profile. 54 104 IPR001005 -
Eupl11g01415 362 SUPERFAMILY Homeodomain-like 4 98 IPR009057 -
Eupl11g01415 362 Coils Coil 262 308 - -
Eupl11g01415 362 Gene3D - 62 121 - -
Eupl11g01415 362 CDD SANT 63 104 IPR001005 -
Eupl11g01415 362 MobiDBLite consensus disorder prediction 202 235 - -
Eupl11g01415 362 SMART sant 3 55 IPR001005 -
Eupl11g01415 362 SMART sant 58 106 IPR001005 -
Eupl11g01415 362 Gene3D - 4 58 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl11g01415 Eupl-Chr11 22006557 22008003 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl11g01415 1 352 MYB Transcription Factor Family AT2G37630 46.096 6.83e-105 311
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Eupl11g01415 Myb_DNA-bind_6 1.4e-13 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl11g01415 K09422 - nnu:104603034 422.165