Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl11g01407 ATGGACTACACAGAGAAGATCAAGAGATGTCAAGAATACGTAGAAGCTTTAGAGCAAGAGCGTCGTAAGATCCAAGTATTCCATCGTGAGCTTCCTTTATGTTTGGAACTCGTCAATCAAGCCATTGAGAATTGCAGGAAACAGATGTGTTTCTCTGAAAACTCTGAATGCGAAGAACAGACATCAAGCGAAGGTCCTGTGTTGGAGGAATTTATTCCATTAAAACGAAGTCCATCTTCCGAAGAAGAACAATCACATAAACCTAATGACAAGATAGGGAAGAAAGTTGATTGGTTAAGATCGGTTCAATTATGGAACCAAATCCCCGATCCACCATTGAAAGAGGATCTGCCTCGAGAAGCTTTAGCGGTTGATATGAAGAAAATTGGAGGCGCATTTCATCCTTTCCAAAGAGATAAAGGGATCACAACAACAACAACAACGTCCGTCGCAACAACGGCGCCATCTTCGACGGCGCCGACGGTTACAACGAGTTCGACCGCCGATACATTTGATGATGGCAATGGTAACAGAGGATTAGAAGAGAAAGGTCAATTAAATAGGAAGGCAAGGAGATGTTGGTCGCCTGAATTACATAAGCGTTTCTTACATGCTCTTCAACAACTTGGTGGTTCTGATGTTGCGACGCCGAAGCAGATTAGGGAATTGATGAAGGTCGATGGGCTTACTAATGACGAAGTCAAAAGTCATTTACAGAAATACCGTTTACATACAAGAAGACCCGGTCAGGCAATTCACAACATCAGCAACCCTCAACCCACTCAGTTTGTTGTCGTGGGAGGCATATGGGTCCCACCACCGGAATATACCATGGTGGCGGCGACAACAACGGGGGAGGCGACGGGGGTCACCGCCAACGGACTCTACACTTCAGTAGCTGCACCACCACATCCGCCATTGGCCGCGTGCTCTAAGCAACAACAAAAACAAAAGAAGCAATTGCATCGGTCTCCATCAGAAGGGACGAGCAGCGAATCGGAGAACAGCATTGCGGATGACCGTGTTCATTCTAGTTCCGAGACAACATCTTCTTCTACCGATACCACGACAGCTTCCCCGGCCTTCTAA 1089 0.4637 MDYTEKIKRCQEYVEALEQERRKIQVFHRELPLCLELVNQAIENCRKQMCFSENSECEEQTSSEGPVLEEFIPLKRSPSSEEEQSHKPNDKIGKKVDWLRSVQLWNQIPDPPLKEDLPREALAVDMKKIGGAFHPFQRDKGITTTTTTSVATTAPSSTAPTVTTSSTADTFDDGNGNRGLEEKGQLNRKARRCWSPELHKRFLHALQQLGGSDVATPKQIRELMKVDGLTNDEVKSHLQKYRLHTRRPGQAIHNISNPQPTQFVVVGGIWVPPPEYTMVAATTTGEATGVTANGLYTSVAAPPHPPLAACSKQQQKQKKQLHRSPSEGTSSESENSIADDRVHSSSETTSSSTDTTTASPAF* 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl11g01407 362 MobiDBLite consensus disorder prediction 147 181 - -
Eupl11g01407 362 MobiDBLite consensus disorder prediction 296 362 - -
Eupl11g01407 362 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 2 344 IPR044787 GO:0003700|GO:0006355
Eupl11g01407 362 NCBIfam myb-like DNA-binding domain, SHAQKYF class 189 244 IPR006447 GO:0003677
Eupl11g01407 362 MobiDBLite consensus disorder prediction 342 362 - -
Eupl11g01407 362 Pfam Myb-like DNA-binding domain 191 242 IPR001005 -
Eupl11g01407 362 MobiDBLite consensus disorder prediction 147 173 - -
Eupl11g01407 362 SUPERFAMILY Homeodomain-like 188 247 IPR009057 -
Eupl11g01407 362 Gene3D - 188 246 - -
Eupl11g01407 362 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 186 246 IPR017930 -
Eupl11g01407 362 FunFam Myb family transcription factor 188 246 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl11g01407 Eupl-Chr11 21858156 21863885 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl11g01407 1 272 G2-like Transcription Factor Family AT1G68670 52.525 2.05e-90 273
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Eupl11g01407 Myb_DNA-binding 3.5e-07 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl11g01407 - - vvi:100257723 399.823