Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl11g01394 ATGGAAAATATGTTGGGTCTTCTAAGAGTTCGGGTCCGTCGAGGCATTAATCTGGCGGTACGCGACGTCCGGAGCAGCGATCCTTATGTCGTCATCAAGATGGGTAAACAGAAGTTGAAGACTCGAGTAATGAAAAAGAATGTCAATCCTGAGTGGAATGAAGATTTAACTCTTTCTGTTGTAGATCCCAATCTTCCAATCAAGCTTACTGTGTACGACAAGGACACATTCAGCATAGATGACAAAATGGGAGATGCAGAGTTTGACATCAAACCATTCCTAGAGGCTTTAAAGATGCATTTGGCAGACCTTCCAAGTGGTACCATAATCACGAGACAGACACCGAGCAGGCAAAACTGCCTGGCTGAAGAGAGCTGCATTATATGGTCCGACGGCAAGGTCGTTCAAGATATTTGTGTGAGACTGAGAAATGTAGAATGTGGTGAAGTGGAACTCCAGCTGCAGTGGATTGACCTTCCAGGTTCCAGGGGCATATAA 498 0.4518 MENMLGLLRVRVRRGINLAVRDVRSSDPYVVIKMGKQKLKTRVMKKNVNPEWNEDLTLSVVDPNLPIKLTVYDKDTFSIDDKMGDAEFDIKPFLEALKMHLADLPSGTIITRQTPSRQNCLAEESCIIWSDGKVVQDICVRLRNVECGEVELQLQWIDLPGSRGI* 166
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl11g01394 165 PANTHER PROTEIN C2-DOMAIN ABA-RELATED 4 3 163 IPR044562 -
Eupl11g01394 165 SMART C2_3c 7 113 IPR000008 -
Eupl11g01394 165 CDD C2_ArfGAP 5 148 - -
Eupl11g01394 165 Pfam C2 domain 6 93 IPR000008 -
Eupl11g01394 165 ProSiteProfiles C2 domain profile. 1 103 IPR000008 -
Eupl11g01394 165 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 6 148 IPR035892 -
Eupl11g01394 165 Gene3D C2 domain 3 160 IPR035892 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl11g01394 Eupl-Chr11 21536748 21549166 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl11g01394 38 165 C2H2 Transcription Factor Family AT1G70790 62.308 9.50e-54 165
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl11g01394 - - vvi:100261135 292.352