Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl11g01359 ATGCCAGGACCTCAAAGGCAGCTCTTGAATCAAGATAAAATATTTAGAAAGGGGAAGAAGAAACCAAGTTCTCTCTCTCAGAGAGAAGAAGAGACCAAAACGATGAGAAAAATCCGAGTTATCTGCTACGACCCCGACGCTACTGATTCTTCCTCGAGCGAAGACGAGGAAAGAAGCAAGAAGAGAAAGAATGGATTTGTCCGTTCTAAGCGTCTGATTCAGGAGATTCGTTTTCCGGTGGATTCGTTTCAGTCCTCCGTTTTGGAAACAGAGAGCTCTTCTCGAAACAGCAACAATGGAGGCAAAAACGCCAACAGATTCTTCAAAAACCCTACTAAAAGGGTTTTACGGAAAACCCCAAAGTCGTCCTCTAAATACCGAGGCGTTCGACAGAGAAGATGGGGCAAATGGGCGGCGGAGATTCGAGACCCTCTTCGTGGTGTTCGTGTCTGGTTAGGTACTTATGATACCGCCGAAGAGGCAGCGGAAGCTTACGAAACCGCTTCGAAGAAGCTCAAATTAGAGCTAGAGAGCATCAGCAACATGTCTTCTTTGTCTGCAACAGACTCCATCTCTCATTCTTCCGTTTCGGAGGAGACTGAAAGTCTCTTCTCTCAGTCGTCTCCTTCATCTGTTCTTGACGTATCCACTTCAGCTTCGCTTGTTGCAGAGCTTCCGCCTCAGCAGCAGCAACAACAAGAAGAAGAACCACCCTTGTCGGATTTTTTCGAGGAGGCATTGCTTTCATCTTCAATTGGGCGAGAACTCGACCTTGGGTTTGAGCTTGATTCATTCCTTGTGAACGATTTTGGGCAGGTTTTTAACGATTTCGGGGACTTGGATGATTTTCAACTCTCTGGGTTCGGATATGACGAACCAAACGACCTTCTAAACTTCGACTTTGATTTTGGTACCGAGGAGCTTGCTTGGATGGATGAACCCCTGAATATAGTCTGCCCATAG 963 0.4642 MPGPQRQLLNQDKIFRKGKKKPSSLSQREEETKTMRKIRVICYDPDATDSSSSEDEERSKKRKNGFVRSKRLIQEIRFPVDSFQSSVLETESSSRNSNNGGKNANRFFKNPTKRVLRKTPKSSSKYRGVRQRRWGKWAAEIRDPLRGVRVWLGTYDTAEEAAEAYETASKKLKLELESISNMSSLSATDSISHSSVSEETESLFSQSSPSSVLDVSTSASLVAELPPQQQQQQEEEPPLSDFFEEALLSSSIGRELDLGFELDSFLVNDFGQVFNDFGDLDDFQLSGFGYDEPNDLLNFDFDFGTEELAWMDEPLNIVCP* 321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl11g01359 320 ProSiteProfiles AP2/ERF domain profile. 125 183 IPR001471 GO:0003700|GO:0006355
Eupl11g01359 320 CDD AP2 124 156 IPR001471 GO:0003700|GO:0006355
Eupl11g01359 320 PANTHER SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR 35 233 - -
Eupl11g01359 320 SMART rav1_2 125 189 IPR001471 GO:0003700|GO:0006355
Eupl11g01359 320 MobiDBLite consensus disorder prediction 1 66 - -
Eupl11g01359 320 Coils Coil 155 182 - -
Eupl11g01359 320 Pfam AP2 domain 124 172 IPR001471 GO:0003700|GO:0006355
Eupl11g01359 320 SUPERFAMILY DNA-binding domain 124 172 IPR016177 GO:0003677
Eupl11g01359 320 MobiDBLite consensus disorder prediction 89 109 - -
Eupl11g01359 320 PRINTS Ethylene responsive element binding protein signature 126 137 IPR001471 GO:0003700|GO:0006355
Eupl11g01359 320 PRINTS Ethylene responsive element binding protein signature 148 164 IPR001471 GO:0003700|GO:0006355
Eupl11g01359 320 Gene3D AP2/ERF domain 124 179 IPR036955 GO:0003700|GO:0006355
Eupl11g01359 320 MobiDBLite consensus disorder prediction 89 106 - -
Eupl11g01359 320 MobiDBLite consensus disorder prediction 12 43 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl11g01359 Eupl-Chr11 20666590 20667552 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl11g01359 17 320 AP2-EREBP Transcription Factor Family AT1G68550 35.890 8.02e-37 132
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-ERF Eupl11g01359 AP2 1.5e-13 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl11g01359 - - nnu:104602974 353.984