Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl11g01339 ATGAGGATGAGCTGTAATGGATGTAGAGTTCTTCGCAAAGGATGCAGCGAGAACTGCAGCATCCGACCTTGCTTACAATGGATCAAAAGCCCCGAATCCCAAGCCAATGCAACTGTTTTCCTCGCCAAGTTCTACGGTCGTGCCGGACTCATGAACCTTATTAATTCCGGTCCCGAACATCTCCGCCCAGCGATTTTCAGATCACTTCTCTATGAGGCCTGTGGACGGATTGTTAATCCAATCTACGGATCCGTCGGTTTGCTCTGGTCCGGGAGCTGGCAACTCTGCCAAACCGCCGTTGAAGCGGTTCTTAAAGGCGCTCCGATCATGCAAATCCCTTCTGAAGCCGCTGTTAGCCCTAGCCCTCCTCTAAAAGCCTACGACATACGACATGTGTCCAAAGATGAGAACTCTGCTGCTTCTCAGGATCTTCACAAGGTTAGAACCCGGACCCGGTTCAAGCGCTCCGCTGGTGCTTCTACTGCGGCTGCTGCCAAGCCCAAGACCAAGCCTAAGGTCACTTCGGTTTCTGAGACTGTTCCGGAACCGGCTGTTACTGACTCGGCTCAGGTTTGTAACCTGAGATGGCGCAGGTATTATCCTGATGACTTCAATCGAGCGCCGAGTCACGATTCGTCGACGAGTCAGCAATCGGAACCGAATGGAGAAGGTTATAGCCGAGAGATGGAAAGCATGTTTTCTGTTGAGACGGTGGAAGCTTCACTTGTGAGCCAAGCCGAGCCGGAATTGGTACCTAAACCTGATATCCATACTGATGATAGCGAGGTCGAATTAGAACTAGAACTGACTCTAGGTTTCGAGCCGGTCTCGCATACTAGCCGTGTCCATCAAACGGGTCCAGTGAATGGAGGGAGCAACATCTACGGCTTAGGTGTTGAGACGTGTAAGATGGAACTAGGACTTGATTATCCGGCATGA 939 0.5133 MRMSCNGCRVLRKGCSENCSIRPCLQWIKSPESQANATVFLAKFYGRAGLMNLINSGPEHLRPAIFRSLLYEACGRIVNPIYGSVGLLWSGSWQLCQTAVEAVLKGAPIMQIPSEAAVSPSPPLKAYDIRHVSKDENSAASQDLHKVRTRTRFKRSAGASTAAAAKPKTKPKVTSVSETVPEPAVTDSAQVCNLRWRRYYPDDFNRAPSHDSSTSQQSEPNGEGYSREMESMFSVETVEASLVSQAEPELVPKPDIHTDDSEVELELELTLGFEPVSHTSRVHQTGPVNGGSNIYGLGVETCKMELGLDYPA* 313
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl11g01339 312 PANTHER LOB DOMAIN-CONTAINING PROTEIN 38 3 247 - -
Eupl11g01339 312 MobiDBLite consensus disorder prediction 207 224 - -
Eupl11g01339 312 ProSiteProfiles LOB domain profile. 3 109 IPR004883 -
Eupl11g01339 312 MobiDBLite consensus disorder prediction 204 228 - -
Eupl11g01339 312 PIRSF AS2 1 295 IPR017414 -
Eupl11g01339 312 MobiDBLite consensus disorder prediction 135 183 - -
Eupl11g01339 312 Pfam Lateral organ boundaries (LOB) domain 4 103 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl11g01339 Eupl-Chr11 19846566 19847984 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl11g01339 1 308 AS2 family AT3G02550 50.637 1.38e-92 274
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Eupl11g01339 LOB 1.1e-24 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl11g01339 - - msin:131234978 443.736