Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl11g01329 ATGGAAGTGAACCTTCCTCCTGGGTTTAGATTTCATCCAACAGATGAAGAACTCATTACTTATTATCTAACTCACAAGGTTTCCGATTTTCGTTTTGTGTCGAGAGCCATTACTGACGTTGATCTCAATAAGTGTGAACCTTGGGACCTCCCAGGTAAAGCTACCATGGGGGAGAAAGAGTGGTACTTCTTTAGCTTGAGGGACCGAAAATATCCGACCGGACTTCGAACCAACCGAGCAACGGATGCAGGATATTGGAAAACCACAGGCAAAGACAAGGAGATTTTCCATTCTGGAGTACTGGTTGGGCTGAAGAAAACCCTAGTATTTTACAAGGGTAGAGCTCCTAAAGGAGAGAAAAGCAACTGGGTGATGCATGAATATAGACTTGAAACCAAGTTTTCTTTCAGGCCCACCAAGGAGGAATGGGTGGTTTGTAGGGTCTTCCAAAAGAGTTCAACAGTGAAAAAACCACAGCAGAGCTTGCAGCCATCACTTGATCAGTCTCGTTGTGATACAACCACATTGGTGAACGAGCTCCCGGAGATTGAATTATCGCACTTAAATTGTCTAACCAGTTCGTCAAGCGGTTTCAATAATATTTCCAACGACACAAATGCCAACATGAACATGATCAATTGGGTTCCCACAAGAGAAGCAACAAACCATCCCTCACTTTCTTGGCCTTCAAGTTTACTAAACTCAAATTTTTCGATGAATTCGATGATTCTTAGGGCATTACAGCTCGGTGCGGCATATCAACCAGGAGAAGCTATTAGTACTGATTTAAACTCTTTCGTAGCACAAGCAGATTGTCGCCTCGGAACTGATTTAAATACGAACTTCGCTGCTTCTTCTTCTTCTAAAATTATGGATTCTGCACAGCAACAACCATTCAATCTTGATCCTATATGGCGAAGCTGTTGA 927 0.4272 MEVNLPPGFRFHPTDEELITYYLTHKVSDFRFVSRAITDVDLNKCEPWDLPGKATMGEKEWYFFSLRDRKYPTGLRTNRATDAGYWKTTGKDKEIFHSGVLVGLKKTLVFYKGRAPKGEKSNWVMHEYRLETKFSFRPTKEEWVVCRVFQKSSTVKKPQQSLQPSLDQSRCDTTTLVNELPEIELSHLNCLTSSSSGFNNISNDTNANMNMINWVPTREATNHPSLSWPSSLLNSNFSMNSMILRALQLGAAYQPGEAISTDLNSFVAQADCRLGTDLNTNFAASSSSKIMDSAQQQPFNLDPIWRSC* 309
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl11g01329 308 Pfam No apical meristem (NAM) protein 6 130 IPR003441 GO:0003677|GO:0006355
Eupl11g01329 308 FunFam NAC domain-containing protein 100-like 14 155 - -
Eupl11g01329 308 Gene3D NAC domain 14 156 IPR036093 GO:0003677|GO:0006355
Eupl11g01329 308 ProSiteProfiles NAC domain profile. 5 151 IPR003441 GO:0003677|GO:0006355
Eupl11g01329 308 SUPERFAMILY NAC domain 3 151 IPR036093 GO:0003677|GO:0006355
Eupl11g01329 308 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 4 211 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl11g01329 Eupl-Chr11 19594167 19596440 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl11g01329 1 305 NAC Transcription Factor Family AT3G18400 55.728 6.02e-109 317
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Eupl11g01329 NAM 4.5e-39 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl11g01329 - - ming:122064689 436.032