Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl11g01325 ATGAGACCTGATCAGAGGAACCCATTAGACCTCAACAATTTGCCTGAGGAGTACGGGAGAGAGGGAAAACAGGTCTTGGAGGAGAGTTCCACCATTCGCTCAGAAGCTTCAGATACCACAAGGTGTAGGAAAAAGAAAAATGGAGGGAAGGATGGAAAAGATGAGTGTGAGAAGGTCTACGAGTGTAGGTTTTGCTCCCTCAAGTTCTGCAAATCTCAGGCACTTGGCGGCCACATGAATCGCCATCGCCAAGAAAGGGAGACAGAAACACTGAATCGGGCTCGTCAGCTGGTCTTCAGTAACGAAAACCTAGCCGCACAGGGGGGCCCTCCATTAGGGTTGAGAGATCCGAACCTCGGTGGCAACATGGGAGATCCATCTCTATCCTTTCGACCAGTTTATCCAGCAAGATTATATTCAGGTTCTTCCTCCACCATTTTATCACCAGCAGCACCACCACCGGTGCCTCCTCAACCATATCTCTACACATCGTCTTCCCGCCTTGTTCCCTTGCCCTCACAGTACCCCGTGAATGATTATTTCGTGGGTCACGTCCTCACAGGGAACTCCCACCACAACCCAAATCTGAATTACACTTGCATTGGAGCTCCTATGGGGCATGGCTTCCAACCCGAGGACGGAGACGGATCACTGCGGAATCAGGAGGATGGACTGAATTGGGGTCGTAACTATGCAGGGACACAGCAACGTTTGGATTCTTCTTCGATCAATCGGTTTCATGATGGGTTTAAAGATTGA 759 0.5007 MRPDQRNPLDLNNLPEEYGREGKQVLEESSTIRSEASDTTRCRKKKNGGKDGKDECEKVYECRFCSLKFCKSQALGGHMNRHRQERETETLNRARQLVFSNENLAAQGGPPLGLRDPNLGGNMGDPSLSFRPVYPARLYSGSSSTILSPAAPPPVPPQPYLYTSSSRLVPLPSQYPVNDYFVGHVLTGNSHHNPNLNYTCIGAPMGHGFQPEDGDGSLRNQEDGLNWGRNYAGTQQRLDSSSINRFHDGFKD* 253
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl11g01325 252 PANTHER ZINC FINGER PROTEIN JAGGED 27 210 IPR045320 GO:0003700
Eupl11g01325 252 FunFam Zinc finger protein STAMENLESS 1 34 108 - -
Eupl11g01325 252 MobiDBLite consensus disorder prediction 1 54 - -
Eupl11g01325 252 SUPERFAMILY beta-beta-alpha zinc fingers 57 88 IPR036236 -
Eupl11g01325 252 Gene3D Classic Zinc Finger 33 108 - -
Eupl11g01325 252 MobiDBLite consensus disorder prediction 37 54 - -
Eupl11g01325 252 ProSitePatterns Zinc finger C2H2 type domain signature. 62 82 IPR013087 -
Eupl11g01325 252 ProSiteProfiles Zinc finger C2H2 type domain profile. 60 87 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl11g01325 Eupl-Chr11 19541953 19544411 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl11g01325 1 208 C2H2 Transcription Factor Family AT1G13400 40.529 4.14e-33 117
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl11g01325 - - nnu:104602072 362.073