Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl11g01309 ATGGCTGAGTTTGCAGGAGACTTGCAGAGCTTCAAACCCTCTCTCCCTTTCTTAGAAATAGATTCAAACATGGAACTAATAAGCCAGTTTGCAGAGCTGAACCCAAGTGTGTTGTTGGAGAATCCCAGCTTGAGTTTTCAGAGCTCCATGGGTTTCTCTTATGAGAACTTCTTATCCCAACAACAAACTGAATTCCCCATTAACTTCACTGATAATCTTCTGGGTCTTTTCCATCTCGAGGATCCTAATGCAGTGACAGCCATTGATTCCGTGCCTTCATCAGGAGATGTTCGCCATGAAAGTAAGAAGAGAAAGGTGATGGCAGTATCAGATACCAGCTCGGGGAACTCTTCTACACCAGTTTCAGAAACTGGGTTGGGTGGAAACAATAAGATTAAGAGAAAGAATAGCCAAGGGAGAGGAAAGAGAGGGAGAAGCAAAATTGAGAAGGAAGTGGAGAAACCAAAGGAGGTGATTCATGTGAGAGCAAGAAGAGGCCAGGCTACTGATAGTCACAGTTTAGCTGAAAGGGTAAGAAGAGAAAAGATCAATGAGAGACTTAGATGCTTACAAGACCTTGTTCCAGGGTGCTACAAGACGATGGGGATGGCGGTAATGTTGGACGAGATAATCAACTATGTTCAATCGTTACAGAACCAGGTCGAGTTTCTTTCTATGAAGCTGACAGCAGCCAGTTCTTTCTATGACTTCAACTTGGACATGGAAGCAGTGAAAACAATGCAGGGGACAAATGCATATGAGGCCCAAGAGATGGAGAGGATGGTAAGAGAAGGATATGGAGGAGTCACTTGCTTCCACTCAACATGGTCCCTTTGA 837 0.4421 MAEFAGDLQSFKPSLPFLEIDSNMELISQFAELNPSVLLENPSLSFQSSMGFSYENFLSQQQTEFPINFTDNLLGLFHLEDPNAVTAIDSVPSSGDVRHESKKRKVMAVSDTSSGNSSTPVSETGLGGNNKIKRKNSQGRGKRGRSKIEKEVEKPKEVIHVRARRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDEIINYVQSLQNQVEFLSMKLTAASSFYDFNLDMEAVKTMQGTNAYEAQEMERMVREGYGGVTCFHSTWSL* 279
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl11g01309 278 MobiDBLite consensus disorder prediction 90 151 - -
Eupl11g01309 278 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 167 217 IPR011598 GO:0046983
Eupl11g01309 278 Pfam Helix-loop-helix DNA-binding domain 171 218 IPR011598 GO:0046983
Eupl11g01309 278 CDD bHLH_AtBPE_like 157 240 - -
Eupl11g01309 278 FunFam transcription factor BEE 3-like 164 235 - -
Eupl11g01309 278 MobiDBLite consensus disorder prediction 108 134 - -
Eupl11g01309 278 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 165 235 IPR036638 GO:0046983
Eupl11g01309 278 PANTHER STEROL REGULATORY ELEMENT-BINDING PROTEIN 55 247 IPR024097 GO:0006355
Eupl11g01309 278 Gene3D - 163 235 IPR036638 GO:0046983
Eupl11g01309 278 SMART finulus 173 223 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl11g01309 Eupl-Chr11 19264780 19266498 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl11g01309 1 278 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G73830 45.172 5.33e-61 192
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Eupl11g01309 HLH 2.2e-05 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl11g01309 - - ming:122058368 376.711