Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl11g01306 ATGTCTACTGTTAATAAGAGCTGCAGCTATGATGAAGAAGATATTGAGCTAAGAAGAGGGCCATGGACTCTTGAAGAAGACAATCTTCTCATCCACTACATTGCTTGTCATGGTGAAGGTCGTTGGAACCTTTTAGCCAAATGTTCAGGATTGAAGAGAACTGGCAAGAGCTGTAGATTAAGATGGCTGAATTATTTGAAGCCGGACGTTAAGCGTGGAAACCTTACGCCAGAAGAACAGATCTTGATTCTTGAACTCCATTCCAAGTGGGGTAACAGGTGGTCTAAGATTGCACAACATCTACCAGGAAGAACAGACAATGAAATAAAGAACTACTGGAGAACAAGGGTGCAGAAACAAGCGCGGCAGCTCAAGATCGACGCTAATAGCACGAGCTTTCGAGATGTGATTCGATGCTTTTGGATGCCAAGATTGCTTCAGAAGATGGAAGAATCGTCTCGCCCTTTATCAACCATGAAATCTCAAAGTTCAACAACTCCTCTACTACTCAATCAGGCCCCTCAAGCACCATCGCCACAACAGTATCTCAGCGGAGCGATAAAGAGTTTAAATCATCAAGAGCATAATTCAAGCTCAGAGAACTGCACCAGCCCAAGCATCTGTTCATCAGATTCCATGAACATCTCGCAACTCCCTGAAATTTCAGAATACCCAAGAAGCCCACATGCTTTTGGCAACATTGTTTACAATCCGATAGAAAAGAGTTGTAATTACTATATGGACAACAGTAACTATGACGTGGAGAACTTCAACCTGACCCCCATGTCAGCACTGGGGAGCTGTGACAATTTGATGTATGATTGCCACATGGCAGAGAGTAATCGGGTCGATGGTGAGGTGGCAAATAGTCTCTGGGACATGGATGAGTTATGGCAGTTCAGATAG 906 0.4393 MSTVNKSCSYDEEDIELRRGPWTLEEDNLLIHYIACHGEGRWNLLAKCSGLKRTGKSCRLRWLNYLKPDVKRGNLTPEEQILILELHSKWGNRWSKIAQHLPGRTDNEIKNYWRTRVQKQARQLKIDANSTSFRDVIRCFWMPRLLQKMEESSRPLSTMKSQSSTTPLLLNQAPQAPSPQQYLSGAIKSLNHQEHNSSSENCTSPSICSSDSMNISQLPEISEYPRSPHAFGNIVYNPIEKSCNYYMDNSNYDVENFNLTPMSALGSCDNLMYDCHMAESNRVDGEVANSLWDMDELWQFR* 302
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl11g01306 301 Gene3D - 20 71 - -
Eupl11g01306 301 FunFam Myb transcription factor 19 71 - -
Eupl11g01306 301 ProSiteProfiles Myb-like domain profile. 67 117 IPR001005 -
Eupl11g01306 301 ProSiteProfiles Myb-like domain profile. 14 66 IPR001005 -
Eupl11g01306 301 FunFam MYB transcription factor 76 139 - -
Eupl11g01306 301 Pfam Myb-like DNA-binding domain 72 115 IPR001005 -
Eupl11g01306 301 Pfam Myb-like DNA-binding domain 19 66 IPR001005 -
Eupl11g01306 301 Gene3D - 75 120 - -
Eupl11g01306 301 PANTHER MYB TRANSCRIPTION FACTOR-RELATED-RELATED 16 204 IPR044676 GO:0003700|GO:0006355|GO:0043565
Eupl11g01306 301 CDD SANT 76 115 IPR001005 -
Eupl11g01306 301 SUPERFAMILY Homeodomain-like 17 113 IPR009057 -
Eupl11g01306 301 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 14 66 IPR017930 -
Eupl11g01306 301 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 67 121 IPR017930 -
Eupl11g01306 301 SMART sant 71 119 IPR001005 -
Eupl11g01306 301 SMART sant 18 68 IPR001005 -
Eupl11g01306 301 CDD SANT 21 66 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl11g01306 Eupl-Chr11 19220607 19222325 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl11g01306 14 301 MYB Transcription Factor Family AT1G68320 47.619 4.68e-86 258
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Eupl11g01306 Myb_DNA-binding 5e-15 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl11g01306 K09422 - nnu:104602925 411.379