Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl11g01303 ATGTATACGGCGAGAAGGAAAATCCAGAAAGACAAGGATGCTGAACCAACTGAGTTTGAGGAGTCAGTTGCGCAGTCGTTGTTTGATTTAGAGAACACCAACCAGGAGCTCAAAAGTGAATTGAAGGATCTTTACATAAATTCTGCAGTTCAAATTGATGTTTCTGGGAACCGGAAAGCTGTTGTAATCCATGTTCCTTACAGACTGAGGAAAGCTTTCCGCAAAATTCATGTGAGGCTTGTGAGGGAGCTGGAGAAGAAATTCAGTGGGAAGGATGTGATCGTGATTGCTACTCGAAGGATTTTGAGGCCACCAAAGAAAGGTTCTGCAGCTCAACGACCACGCAGCCGCACACTCACCGCTGTGCATGATGCCATGCTGGAGGATGTTGTGTATCCTGCTGAGATTGTAGGGAAGCGCGTCAGATACCGGATCGATGGGTCCAAAATTATTAAGATTTTCCTGGACCCTAAGGAGAGGAACAACACTGAATACAAGCTGGAGACTTTTGCTGGAGTCTACAGGAAGCTTTCTGGGAAAGATGTTGTGTTTGAGTTCCCGATTACGGATGCGTAA 576 0.4583 MYTARRKIQKDKDAEPTEFEESVAQSLFDLENTNQELKSELKDLYINSAVQIDVSGNRKAVVIHVPYRLRKAFRKIHVRLVRELEKKFSGKDVIVIATRRILRPPKKGSAAQRPRSRTLTAVHDAMLEDVVYPAEIVGKRVRYRIDGSKIIKIFLDPKERNNTEYKLETFAGVYRKLSGKDVVFEFPITDA* 192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl11g01303 191 Pfam Ribosomal protein S7e 7 186 IPR000554 GO:0003735|GO:0005840|GO:0006412
Eupl11g01303 191 Coils Coil 27 47 - -
Eupl11g01303 191 ProSitePatterns Ribosomal protein S7e signature. 79 92 IPR000554 GO:0003735|GO:0005840|GO:0006412
Eupl11g01303 191 PANTHER 40S RIBOSOMAL PROTEIN S7 1 190 IPR000554 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl11g01303 Eupl-Chr11 19128875 19132146 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl11g01303 1 188 Cytoplasmic Ribosomal Protein Gene Family AT5G16130 79.787 2.40e-114 321
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl11g01303 K02993 - nnu:104602332 360.918